EnhancerDB
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  3. rs540353678[chr17:38502899]
Enhancers that have rs540353678[chr17:38502899]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38486105 38510075 enh60669
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Lung (PC-9) Uterus Blood (T-cell) Stomach
chr17 38502716 38503032 vista24712
VISTA
Transcript factors that have rs540353678[chr17:38502899]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38502565 38503085 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108254745
chr17 38502881 38502901 RREB1 JASPAR yes 21234694
chr17 38502881 38502901 RREB1 JASPAR yes 54208575
chr17 38502882 38502902 RREB1 JASPAR yes 21234695
chr17 38502882 38502902 RREB1 JASPAR yes 54208576
chr17 38502883 38502903 RREB1 JASPAR yes 21234696
chr17 38502883 38502903 RREB1 JASPAR yes 54208577
chr17 38502884 38502904 RREB1 JASPAR yes 21234697
chr17 38502884 38502904 RREB1 JASPAR yes 54208578
chr17 38502889 38502899 SP1 JASPAR yes 21234701
chr17 38502889 38502899 SP1 JASPAR yes 54208582
chr17 38502893 38502903 ZNF740 JASPAR yes 21234706
chr17 38502893 38502903 ZNF740 JASPAR yes 54208587
Genes associated with rs540353678[chr17:38502899], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More