EnhancerDB
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  3. rs528253660[chr17:38502894]
Enhancers that have rs528253660[chr17:38502894]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38486105 38510075 enh60669
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Lung (PC-9) Uterus Blood (T-cell) Stomach
chr17 38502716 38503032 vista24712
VISTA
Transcript factors that have rs528253660[chr17:38502894]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38502565 38503085 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108254745
chr17 38502881 38502901 RREB1 JASPAR yes 21234694
chr17 38502881 38502901 RREB1 JASPAR yes 54208575
chr17 38502882 38502902 RREB1 JASPAR yes 21234695
chr17 38502882 38502902 RREB1 JASPAR yes 54208576
chr17 38502883 38502903 RREB1 JASPAR yes 21234696
chr17 38502883 38502903 RREB1 JASPAR yes 54208577
chr17 38502884 38502904 RREB1 JASPAR yes 21234697
chr17 38502884 38502904 RREB1 JASPAR yes 54208578
chr17 38502888 38502896 SP1 TRANSFAC yes 21234698
chr17 38502888 38502896 SP1 TRANSFAC yes 54208579
chr17 38502888 38502898 SP1 JASPAR yes 21234699
chr17 38502888 38502898 SP1 JASPAR yes 54208580
chr17 38502889 38502895 SP1 TRANSFAC yes 21234700
chr17 38502889 38502895 SP1 TRANSFAC yes 54208581
chr17 38502889 38502899 SP1 JASPAR yes 21234701
chr17 38502889 38502899 SP1 JASPAR yes 54208582
chr17 38502890 38502897 SP1 TRANSFAC yes 21234702
chr17 38502890 38502897 SP1 TRANSFAC yes 54208583
chr17 38502891 38502896 SP1 TRANSFAC yes 21234703
chr17 38502891 38502896 SP1 TRANSFAC yes 54208584
chr17 38502891 38502897 SP1 TRANSFAC yes 21234704
chr17 38502891 38502897 SP1 TRANSFAC yes 54208585
chr17 38502891 38502898 SP1 TRANSFAC yes 21234705
chr17 38502891 38502898 SP1 TRANSFAC yes 54208586
chr17 38502893 38502903 ZNF740 JASPAR yes 21234706
chr17 38502893 38502903 ZNF740 JASPAR yes 54208587
Genes associated with rs528253660[chr17:38502894], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More