EnhancerDB
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  3. vista24717[chr17:38603509-38603888]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24717[chr17:38603509-38603888]
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Tissue distribution of vista24717
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Transcription factor that possibly regulate vista24717[chr17:38603509-38603888]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38603281 38603747 POLR2A UCSC Txn Factor no Conserved 108255041
chr17 38603455 38603826 NR3C1 UCSC Txn Factor no Conserved 108255042
chr17 38603501 38603511 MAX JASPAR yes 21234965
chr17 38603501 38603511 MAX JASPAR yes 54211565
chr17 38603523 38603534 TBX20 JASPAR yes 21234966
chr17 38603523 38603534 TBX20 JASPAR yes 54211566
chr17 38603525 38603528 MYB TRANSFAC yes 21234967
chr17 38603525 38603528 MYB TRANSFAC yes 54211567
chr17 38603549 38603559 SP1 JASPAR yes 21234968
chr17 38603549 38603559 SP1 JASPAR yes 54211568
chr17 38603551 38603556 SP1 TRANSFAC yes 21234969
chr17 38603551 38603556 SP1 TRANSFAC yes 54211569
chr17 38603552 38603557 SP1 TRANSFAC yes 21234970
chr17 38603552 38603557 SP1 TRANSFAC yes 54211570
chr17 38603552 38603558 SP1 TRANSFAC yes 21234971
chr17 38603552 38603558 SP1 TRANSFAC yes 54211571
chr17 38603555 38603569 MTF1 JASPAR yes 21234972
chr17 38603555 38603569 MTF1 JASPAR yes 54211572
chr17 38603575 38603583 TBX5 JASPAR yes 21234973
chr17 38603575 38603583 TBX5 JASPAR yes 54211573
chr17 38603581 38603597 ZNF143 JASPAR yes 21234974
chr17 38603581 38603597 ZNF143 JASPAR yes 54211574
chr17 38603584 38603595 SPDEF JASPAR yes 21234975
chr17 38603584 38603595 SPDEF JASPAR yes 54211575
chr17 38603619 38603640 ZNF263 JASPAR yes 21234976
chr17 38603619 38603640 ZNF263 JASPAR yes 54211576
chr17 38603633 38603639 ETS1 JASPAR yes 21234977
chr17 38603633 38603639 ETS1 JASPAR yes 54211577
chr17 38603654 38603664 NFKB1 JASPAR yes 21234978
chr17 38603654 38603664 REL JASPAR yes 21234979
chr17 38603654 38603664 NFKB1 JASPAR yes 54211578
chr17 38603654 38603664 REL JASPAR yes 54211579
chr17 38603654 38603665 NFKB1 JASPAR yes 21234980
chr17 38603654 38603665 NFKB1 JASPAR yes 54211580
chr17 38603693 38603710 RXRA JASPAR yes 21234981
chr17 38603693 38603710 RXRA JASPAR yes 54211581
chr17 38603715 38603730 HNF1A JASPAR yes 21234982
chr17 38603715 38603730 HNF1A JASPAR yes 54211582
chr17 38603716 38603728 HNF1B JASPAR yes 21234983
chr17 38603716 38603728 HNF1B JASPAR yes 54211583
chr17 38603716 38603729 HNF1B JASPAR yes 21234984
chr17 38603716 38603729 HNF1B JASPAR yes 54211584
chr17 38603717 38603729 MEF2B JASPAR yes 21234985
chr17 38603717 38603729 MEF2B JASPAR yes 54211585
chr17 38603743 38603749 NFE2 TRANSFAC yes 21234986
chr17 38603743 38603749 NFE2 TRANSFAC yes 54211586
chr17 38603745 38603755 ZNF740 JASPAR yes 21234987
chr17 38603745 38603755 ZNF740 JASPAR yes 54211587
chr17 38603772 38603784 DBP JASPAR yes 21234988
chr17 38603772 38603784 HLF JASPAR yes 21234989
chr17 38603772 38603784 JDP2 JASPAR yes 21234990
chr17 38603772 38603784 DBP JASPAR yes 54211588
chr17 38603772 38603784 HLF JASPAR yes 54211589
chr17 38603772 38603784 JDP2 JASPAR yes 54211590
chr17 38603777 38603792 RFX5 JASPAR yes 21234991
chr17 38603777 38603792 RFX5 JASPAR yes 54211591
chr17 38603789 38603809 TP53 JASPAR yes 21234992
chr17 38603789 38603809 TP53 JASPAR yes 54211592
chr17 38603790 38603801 NFKB1 JASPAR yes 21234993
chr17 38603790 38603801 NFKB1 JASPAR yes 54211593
chr17 38603791 38603795 LFA1 TRANSFAC yes 21234994
chr17 38603791 38603795 LFA1 TRANSFAC yes 54211594
chr17 38603791 38603801 NFKB1 JASPAR yes 21234995
chr17 38603791 38603801 NFKB1 JASPAR yes 54211595
chr17 38603791 38603802 NFKB1 JASPAR yes 21234996
chr17 38603791 38603802 NFKB1 JASPAR yes 54211596
chr17 38603793 38603808 STAT1 JASPAR yes 21234997
chr17 38603793 38603808 STAT1 JASPAR yes 54211597
chr17 38603795 38603806 STAT1 JASPAR yes 21234998
chr17 38603795 38603806 STAT3 JASPAR yes 21234999
chr17 38603795 38603806 STAT1 JASPAR yes 54211598
chr17 38603795 38603806 STAT3 JASPAR yes 54211599
chr17 38603811 38603824 TFAP2A JASPAR yes 21235000
chr17 38603811 38603824 TFAP2B JASPAR yes 21235001
chr17 38603811 38603824 TFAP2C JASPAR yes 21235002
chr17 38603811 38603824 TFAP2A JASPAR yes 54211600
chr17 38603811 38603824 TFAP2B JASPAR yes 54211601
chr17 38603811 38603824 TFAP2C JASPAR yes 54211602
chr17 38603817 38603827 ZNF740 JASPAR yes 21235003
chr17 38603817 38603827 ZNF740 JASPAR yes 54211603
chr17 38603818 38603823 TFAP2A TRANSFAC yes 21235004
chr17 38603818 38603823 TFAP2A TRANSFAC yes 54211604
chr17 38603818 38603824 MZF1 JASPAR yes 21235005
chr17 38603818 38603824 MZF1 JASPAR yes 54211605
chr17 38603818 38603828 SP1 JASPAR yes 21235006
chr17 38603818 38603828 SP1 JASPAR yes 54211606
chr17 38603818 38603839 ZNF263 JASPAR yes 21235007
chr17 38603818 38603839 ZNF263 JASPAR yes 54211607
chr17 38603819 38603829 SP1 JASPAR yes 21235008
chr17 38603819 38603829 SP1 JASPAR yes 54211608
chr17 38603820 38603826 MAZ TRANSFAC yes 21235009
chr17 38603820 38603826 MAZ TRANSFAC yes 54211609
chr17 38603821 38603831 MZF1 JASPAR yes 21235010
chr17 38603821 38603831 MZF1 JASPAR yes 54211610
chr17 38603824 38603834 SP1 JASPAR yes 21235011
chr17 38603824 38603834 SP1 JASPAR yes 54211611
chr17 38603826 38603832 MAZ TRANSFAC yes 21235012
chr17 38603826 38603832 MAZ TRANSFAC yes 54211612
chr17 38603826 38603837 E2F6 JASPAR yes 21235013
chr17 38603826 38603837 E2F6 JASPAR yes 54211613
chr17 38603844 38603858 SPI1 JASPAR yes 21235014
chr17 38603844 38603858 SPI1 JASPAR yes 54211614
chr17 38603849 38603865 POU4F2 JASPAR yes 21235015
chr17 38603849 38603865 POU4F3 JASPAR yes 21235016
chr17 38603849 38603865 POU4F2 JASPAR yes 54211615
chr17 38603849 38603865 POU4F3 JASPAR yes 54211616
chr17 38603851 38603855 YY1 TRANSFAC yes 21235017
chr17 38603851 38603855 YY1 TRANSFAC yes 54211617
chr17 38603851 38603865 POU4F1 JASPAR yes 21235018
chr17 38603851 38603865 POU4F1 JASPAR yes 54211618
chr17 38603852 38603866 IRF7 JASPAR yes 21235019
chr17 38603852 38603866 IRF7 JASPAR yes 54211619
SNP sites on vista24717[chr17:38603509-38603888]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38603549 rs4890114 A G
NR3C1 POLR2A SP1
4866939
chr17 38603560 rs148459654 C T
MTF1 NR3C1 POLR2A
4866940
chr17 38603655 rs10305286 G A,C
NFKB1 NR3C1 POLR2A REL
4866941
chr17 38603667 rs10305287 A C,G
NR3C1 POLR2A
4866942
chr17 38603688 rs559625672 G A
NR3C1 POLR2A
4866943
chr17 38603780 rs552181962 T C
DBP HLF JDP2 NR3C1 RFX5
4866944
chr17 38603868 rs140275471 C T no 4866945
Genes possibly regulated by vista24717[chr17:38603509-38603888]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38516907 38520945 + CTD-2267D19.3 ENSG00000266208.1 38516907 0.82 0.99 15765 13398
chr17 38517235 38520067 - GJD3 ENSG00000183153.5 38520067 0.97 1.0 15766 16558
chr17 38544768 38574202 - TOP2A ENSG00000131747.10 38574202 0.95 0.97 15767 70693
chr17 38599702 38613983 + IGFBP4 ENSG00000141753.5 38599702 0.84 0.98 15768 96193
chr17 38632080 38657849 - TNS4 ENSG00000131746.8 38657849 0.98 0.99 15769 46039
Expression level of Genes
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miRNAs possibly regulated by vista24717[chr17:38603509-38603888]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results