EnhancerDB
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  3. rs4890114[chr17:38603549]
Enhancers that have rs4890114[chr17:38603549]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38602565 38623375 enh52499
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Uterus Pancreas Neural Stem Cells (H9) Heart
chr17 38603509 38603888 vista24717
VISTA
Transcript factors that have rs4890114[chr17:38603549]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38602709 38603953 TCF7L2 GTRD no Colon (HCT116) 108255035
chr17 38602709 38603953 TCF7L2 GTRD no Colon (HCT116) 108255036
chr17 38602767 38603593 ZNF274 GTRD no Bone Marrow (K562) 108255037
chr17 38602767 38603593 ZNF274 GTRD no Bone Marrow (K562) 108255038
chr17 38603281 38603747 POLR2A UCSC Txn Factor no Conserved 108255041
chr17 38603455 38603826 NR3C1 UCSC Txn Factor no Conserved 108255042
chr17 38603525 38603935 ZNF274 GTRD no Blood (GM12878) 108255043
chr17 38603527 38603797 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108255044
chr17 38603542 38603822 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108255045
chr17 38603542 38603826 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108255046
chr17 38603549 38603559 SP1 JASPAR yes 21234968
chr17 38603549 38603559 SP1 JASPAR yes 54211568
Genes associated with rs4890114[chr17:38603549], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More