EnhancerDB
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  3. rs552181962[chr17:38603780]
Enhancers that have rs552181962[chr17:38603780]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38602565 38623375 enh52499
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Uterus Pancreas Neural Stem Cells (H9) Heart
chr17 38603509 38603888 vista24717
VISTA
Transcript factors that have rs552181962[chr17:38603780]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38602709 38603953 TCF7L2 GTRD no Colon (HCT116) 108255035
chr17 38602709 38603953 TCF7L2 GTRD no Colon (HCT116) 108255036
chr17 38603455 38603826 NR3C1 UCSC Txn Factor no Conserved 108255042
chr17 38603525 38603935 ZNF274 GTRD no Blood (GM12878) 108255043
chr17 38603527 38603797 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108255044
chr17 38603542 38603822 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108255045
chr17 38603542 38603826 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108255046
chr17 38603555 38603899 ZNF274 GTRD no Blood (GM12878) 108255047
chr17 38603587 38603863 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21753889
chr17 38603587 38603863 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108255048
chr17 38603605 38603845 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21753890
chr17 38603605 38603845 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108255049
chr17 38603740 38604304 ZNF274 GTRD no Blood (GM12878) 108255050
chr17 38603772 38603784 DBP JASPAR yes 21234988
chr17 38603772 38603784 HLF JASPAR yes 21234989
chr17 38603772 38603784 JDP2 JASPAR yes 21234990
chr17 38603772 38603784 DBP JASPAR yes 54211588
chr17 38603772 38603784 HLF JASPAR yes 54211589
chr17 38603772 38603784 JDP2 JASPAR yes 54211590
chr17 38603777 38603792 RFX5 JASPAR yes 21234991
chr17 38603777 38603792 RFX5 JASPAR yes 54211591
Genes associated with rs552181962[chr17:38603780], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More