EnhancerDB
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  3. vista24741[chr17:38719281-38720198]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24741[chr17:38719281-38720198]
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Tissue distribution of vista24741
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Transcription factor that possibly regulate vista24741[chr17:38719281-38720198]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256529
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256530
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256531
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256532
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256533
chr17 38719318 38719332 RORA JASPAR yes 21236356
chr17 38719318 38719332 RORA JASPAR yes 54226848
chr17 38719320 38719338 IRF2 JASPAR yes 21236357
chr17 38719320 38719338 IRF2 JASPAR yes 54226849
chr17 38719324 38719344 PPARG JASPAR yes 21236358
chr17 38719324 38719344 PPARG JASPAR yes 54226850
chr17 38719344 38719361 RXRA JASPAR yes 21236359
chr17 38719344 38719361 RXRA JASPAR yes 54226851
chr17 38719361 38719365 ESR1 TRANSFAC yes 21236360
chr17 38719361 38719365 ESR1 TRANSFAC yes 54226852
chr17 38719371 38719376 GATA1 TRANSFAC yes 21236361
chr17 38719371 38719376 GATA1 TRANSFAC yes 54226853
chr17 38719389 38719404 ESR2 JASPAR yes 21236362
chr17 38719389 38719404 ESR2 JASPAR yes 54226854
chr17 38719393 38719399 SOX10 JASPAR yes 21236363
chr17 38719393 38719399 SOX10 JASPAR yes 54226855
chr17 38719398 38719410 BHLHE23 JASPAR yes 21236364
chr17 38719398 38719410 PKNOX1 JASPAR yes 21236365
chr17 38719398 38719410 PKNOX2 JASPAR yes 21236366
chr17 38719398 38719410 BHLHE23 JASPAR yes 54226856
chr17 38719398 38719410 PKNOX1 JASPAR yes 54226857
chr17 38719398 38719410 PKNOX2 JASPAR yes 54226858
chr17 38719399 38719409 BHLHE22 JASPAR yes 21236367
chr17 38719399 38719409 NEUROG2 JASPAR yes 21236368
chr17 38719399 38719409 OLIG1 JASPAR yes 21236369
chr17 38719399 38719409 OLIG2 JASPAR yes 21236370
chr17 38719399 38719409 OLIG3 JASPAR yes 21236371
chr17 38719399 38719409 BHLHE22 JASPAR yes 54226859
chr17 38719399 38719409 NEUROG2 JASPAR yes 54226860
chr17 38719399 38719409 OLIG1 JASPAR yes 54226861
chr17 38719399 38719409 OLIG2 JASPAR yes 54226862
chr17 38719399 38719409 OLIG3 JASPAR yes 54226863
chr17 38719404 38719418 JUN JASPAR yes 21236372
chr17 38719404 38719418 JUN JASPAR yes 54226864
chr17 38719415 38719421 MZF1 JASPAR yes 21236373
chr17 38719415 38719421 MZF1 JASPAR yes 54226865
chr17 38719428 38719432 ESR1 TRANSFAC yes 21236374
chr17 38719428 38719432 ESR1 TRANSFAC yes 54226866
chr17 38719447 38719456 SOX9 JASPAR yes 21236375
chr17 38719447 38719456 SOX9 JASPAR yes 54226867
chr17 38719447 38719462 PRDM1 JASPAR yes 21236376
chr17 38719447 38719462 PRDM1 JASPAR yes 54226868
chr17 38719491 38719501 NFATC3 JASPAR yes 21236377
chr17 38719491 38719501 NFATC3 JASPAR yes 54226869
chr17 38719492 38719499 NFATC2 JASPAR yes 21236378
chr17 38719492 38719499 NFATC2 JASPAR yes 54226870
chr17 38719503 38719515 INSM1 JASPAR yes 21236379
chr17 38719503 38719515 INSM1 JASPAR yes 54226871
chr17 38719521 38719528 SPIB JASPAR yes 21236380
chr17 38719521 38719528 SPIB JASPAR yes 54226872
chr17 38719530 38719536 MZF1 JASPAR yes 21236381
chr17 38719530 38719536 MZF1 JASPAR yes 54226873
chr17 38719584 38719598 PLAG1 JASPAR yes 21236382
chr17 38719584 38719598 PLAG1 JASPAR yes 54226874
chr17 38719588 38719602 E2F7 JASPAR yes 21236383
chr17 38719588 38719602 E2F7 JASPAR yes 54226875
chr17 38719595 38719605 BARHL2 JASPAR yes 21236384
chr17 38719595 38719605 BARHL2 JASPAR yes 54226876
chr17 38719597 38719601 YY1 TRANSFAC yes 21236385
chr17 38719597 38719601 YY1 TRANSFAC yes 54226877
chr17 38719609 38719622 SMAD2 JASPAR yes 21236386
chr17 38719609 38719622 SMAD2 JASPAR yes 54226878
chr17 38719632 38719646 STAT1 JASPAR yes 21236387
chr17 38719632 38719646 STAT1 JASPAR yes 54226879
chr17 38719638 38719642 YY1 TRANSFAC yes 21236388
chr17 38719638 38719642 YY1 TRANSFAC yes 54226880
chr17 38719644 38719649 ETS2 TRANSFAC yes 21236389
chr17 38719644 38719649 ETS2 TRANSFAC yes 54226881
chr17 38719651 38719657 TCF4 TRANSFAC yes 21236390
chr17 38719651 38719657 TCF4 TRANSFAC yes 54226882
chr17 38719664 38719675 CEBPA JASPAR yes 21236391
chr17 38719664 38719675 CEBPA JASPAR yes 54226883
chr17 38719665 38719676 CEBPB JASPAR yes 21236392
chr17 38719665 38719676 CEBPB JASPAR yes 54226884
chr17 38719668 38719674 TCF4 TRANSFAC yes 21236393
chr17 38719668 38719674 TCF4 TRANSFAC yes 54226885
chr17 38719697 38719702 SP1 TRANSFAC yes 21236394
chr17 38719697 38719702 SP1 TRANSFAC yes 54226886
chr17 38719698 38719708 ZNF740 JASPAR yes 21236395
chr17 38719698 38719708 ZNF740 JASPAR yes 54226887
chr17 38719699 38719704 TFAP2A TRANSFAC yes 21236396
chr17 38719699 38719704 TFAP2A TRANSFAC yes 54226888
chr17 38719699 38719705 MZF1 JASPAR yes 21236397
chr17 38719699 38719705 MZF1 JASPAR yes 54226889
chr17 38719699 38719709 SP1 JASPAR yes 21236398
chr17 38719699 38719709 SP1 JASPAR yes 54226890
chr17 38719701 38719707 MAZ TRANSFAC yes 21236399
chr17 38719701 38719707 MAZ TRANSFAC yes 54226891
chr17 38719740 38719760 TP63 JASPAR yes 21236400
chr17 38719740 38719760 TP63 JASPAR yes 54226892
chr17 38719760 38719771 NFKB1 JASPAR yes 21236401
chr17 38719760 38719771 NFKB1 JASPAR yes 54226893
chr17 38719764 38719776 IRF1 JASPAR yes 21236402
chr17 38719764 38719776 IRF1 JASPAR yes 54226894
chr17 38719764 38719778 IRF7 JASPAR yes 21236403
chr17 38719764 38719778 IRF7 JASPAR yes 54226895
chr17 38719769 38719773 YY1 TRANSFAC yes 21236404
chr17 38719769 38719773 YY1 TRANSFAC yes 54226896
chr17 38719771 38719783 HLF JASPAR yes 21236405
chr17 38719771 38719783 HLF JASPAR yes 54226897
chr17 38719773 38719781 NF-IL6 TRANSFAC yes 21236406
chr17 38719773 38719781 NF-IL6 TRANSFAC yes 54226898
chr17 38719778 38719781 MYB TRANSFAC yes 21236407
chr17 38719778 38719781 MYB TRANSFAC yes 54226899
chr17 38719786 38719796 SP1 JASPAR yes 21236408
chr17 38719786 38719796 SP1 JASPAR yes 54226900
chr17 38719787 38719798 E2F6 JASPAR yes 21236409
chr17 38719787 38719798 E2F6 JASPAR yes 54226901
chr17 38719788 38719809 ZNF263 JASPAR yes 21236410
chr17 38719788 38719809 ZNF263 JASPAR yes 54226902
chr17 38719794 38719815 ZNF263 JASPAR yes 21236411
chr17 38719794 38719815 ZNF263 JASPAR yes 54226903
chr17 38719797 38719818 ZNF263 JASPAR yes 21236412
chr17 38719797 38719818 ZNF263 JASPAR yes 54226904
chr17 38719801 38719814 SCRT2 JASPAR yes 21236413
chr17 38719801 38719814 SCRT2 JASPAR yes 54226905
chr17 38719820 38719824 LFA1 TRANSFAC yes 21236414
chr17 38719820 38719824 LFA1 TRANSFAC yes 54226906
chr17 38719859 38719869 SP1 JASPAR yes 21236415
chr17 38719859 38719869 SP1 JASPAR yes 54226907
chr17 38719859 38719879 RREB1 JASPAR yes 21236416
chr17 38719859 38719879 RREB1 JASPAR yes 54226908
chr17 38719862 38719882 RREB1 JASPAR yes 21236417
chr17 38719862 38719882 RREB1 JASPAR yes 54226909
chr17 38719892 38719898 JUN TRANSFAC yes 21236418
chr17 38719892 38719898 JUN TRANSFAC yes 54226910
chr17 38719907 38719920 NFKB1 JASPAR yes 21236419
chr17 38719907 38719920 NFKB1 JASPAR yes 54226911
chr17 38719912 38719922 MZF1 JASPAR yes 21236420
chr17 38719912 38719922 MZF1 JASPAR yes 54226912
chr17 38719915 38719921 SP1 TRANSFAC yes 21236421
chr17 38719915 38719921 SP1 TRANSFAC yes 54226913
chr17 38719915 38719925 SP1 JASPAR yes 21236422
chr17 38719915 38719925 SP1 JASPAR yes 54226914
chr17 38719928 38719932 YY1 TRANSFAC yes 21236423
chr17 38719928 38719932 YY1 TRANSFAC yes 54226915
chr17 38719965 38719974 NKX2-8 JASPAR yes 21236424
chr17 38719965 38719974 NKX2-8 JASPAR yes 54226916
chr17 38719965 38719975 NKX2-3 JASPAR yes 21236425
chr17 38719965 38719975 NKX2-3 JASPAR yes 54226917
chr17 38719980 38719985 GATA2 JASPAR yes 21236426
chr17 38719980 38719985 GATA2 JASPAR yes 54226918
chr17 38719986 38719999 ELF1 JASPAR yes 21236427
chr17 38719986 38719999 ELF1 JASPAR yes 54226919
chr17 38720003 38720024 ZNF263 JASPAR yes 21236428
chr17 38720003 38720024 ZNF263 JASPAR yes 54226920
chr17 38720017 38720031 TCF7L2 JASPAR yes 21236429
chr17 38720017 38720031 TCF7L2 JASPAR yes 54226921
chr17 38720017 38720032 LEF1 JASPAR yes 21236430
chr17 38720017 38720032 LEF1 JASPAR yes 54226922
chr17 38720033 38720046 SMAD2 JASPAR yes 21236431
chr17 38720033 38720046 SMAD2 JASPAR yes 54226923
chr17 38720054 38720066 INSM1 JASPAR yes 21236432
chr17 38720054 38720066 INSM1 JASPAR yes 54226924
chr17 38720088 38720108 TP63 JASPAR yes 21236433
chr17 38720088 38720108 TP63 JASPAR yes 54226925
chr17 38720091 38720106 TP53 JASPAR yes 21236434
chr17 38720091 38720106 TP53 JASPAR yes 54226926
chr17 38720107 38720113 YY1 JASPAR yes 21236435
chr17 38720107 38720113 YY1 JASPAR yes 54226927
chr17 38720113 38720127 ONECUT1 JASPAR yes 21236436
chr17 38720113 38720127 ONECUT1 JASPAR yes 54226928
chr17 38720114 38720127 DUXA JASPAR yes 21236437
chr17 38720114 38720127 DUXA JASPAR yes 54226929
chr17 38720115 38720126 DUX4 JASPAR yes 21236438
chr17 38720115 38720126 DUX4 JASPAR yes 54226930
chr17 38720116 38720126 PAX3 JASPAR yes 21236439
chr17 38720116 38720126 PAX7 JASPAR yes 21236440
chr17 38720116 38720126 PAX3 JASPAR yes 54226931
chr17 38720116 38720126 PAX7 JASPAR yes 54226932
chr17 38720116 38720128 PBX1 JASPAR yes 21236441
chr17 38720116 38720128 PBX1 JASPAR yes 54226933
chr17 38720130 38720141 E2F6 JASPAR yes 21236442
chr17 38720130 38720141 E2F6 JASPAR yes 54226934
chr17 38720131 38720136 SP1 TRANSFAC yes 21236443
chr17 38720131 38720136 SP1 TRANSFAC yes 54226935
chr17 38720148 38720158 NFATC3 JASPAR yes 21236444
chr17 38720148 38720158 NFATC3 JASPAR yes 54226936
chr17 38720154 38720164 NFIA JASPAR yes 21236445
chr17 38720154 38720164 NFIA JASPAR yes 54226937
chr17 38720156 38720162 NFIC JASPAR yes 21236446
chr17 38720156 38720162 NFIC JASPAR yes 54226938
chr17 38720176 38720187 NFKB1 JASPAR yes 21236447
chr17 38720176 38720187 NFKB1 JASPAR yes 54226939
chr17 38720177 38720187 NFKB1 JASPAR yes 21236448
chr17 38720177 38720187 NFKB1 JASPAR yes 54226940
chr17 38720180 38720191 E2F6 JASPAR yes 21236449
chr17 38720180 38720191 E2F6 JASPAR yes 54226941
SNP sites on vista24741[chr17:38719281-38720198]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38719336 rs3136686 T A
IRF2 POLR2A PPARG
4868341
chr17 38719474 rs541626690 G T
POLR2A
4868342
chr17 38719597 rs191649719 C A
BARHL2 E2F7 PLAG1 POLR2A YY1
4868343
chr17 38719608 rs76139923 C T
POLR2A
4868344
chr17 38719621 rs144458054 A G
POLR2A SMAD2
4868345
chr17 38719622 rs147847055 C T
POLR2A SMAD2
4868346
chr17 38719747 rs187918147 G T
POLR2A TP63
4868347
chr17 38719752 rs79980507 G T
POLR2A TP63
4868348
chr17 38719778 rs140410580 G A
HLF IRF7 MYB NF-IL6 POLR2A
4868349
chr17 38719799 rs3136685 C T
POLR2A ZNF263
4868350
chr17 38719874 rs534939829 C T
POLR2A RREB1
4868351
chr17 38719934 rs7218603 C T
POLR2A
4868352
chr17 38720022 rs144905753 A G
LEF1 POLR2A TCF7L2 ZNF263
4868353
chr17 38720063 rs565950802 G A
INSM1 POLR2A
4868354
chr17 38720076 rs149050638 C T
POLR2A
4868355
chr17 38720121 rs560001388 C T
DUX4 DUXA ONECUT1 PAX3 PAX7 PBX1 POLR2A
4868356
chr17 38720150 rs144686502 A G
NFATC3 POLR2A
4868357
chr17 38720196 rs76272995 G C
POLR2A
4868358
Genes possibly regulated by vista24741[chr17:38719281-38720198]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38632080 38657849 - TNS4 ENSG00000131746.8 38657849 0.98 0.99 15769 38568
chr17 38710021 38721724 - CCR7 ENSG00000126353.3 38721724 0.98 0.94 15770 98474
chr17 38781214 38804760 - SMARCE1 ENSG00000073584.14 38804760 0.77 0.97 15771 15438
Expression level of Genes
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miRNAs possibly regulated by vista24741[chr17:38719281-38720198]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results