EnhancerDB
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  3. rs140410580[chr17:38719778]
Enhancers that have rs140410580[chr17:38719778]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 38719281 38720198 vista24741
VISTA
Transcript factors that have rs140410580[chr17:38719778]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756012
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256529
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256530
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256531
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256532
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256533
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256534
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256535
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256536
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256537
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256538
chr17 38718223 38719795 ZNF274 GTRD no Blood (GM12878) 21756185
chr17 38718223 38719795 ZNF274 GTRD no Blood (GM12878) 108256766
chr17 38718223 38719795 ZNF274 GTRD no Blood (GM12878) 108256767
chr17 38718282 38720793 TCF7L2 GTRD no Colon (HCT116) 21756198
chr17 38718282 38720793 TCF7L2 GTRD no Colon (HCT116) 108256789
chr17 38718282 38720793 TCF7L2 GTRD no Colon (HCT116) 108256790
chr17 38718290 38720827 ZNF274 GTRD no Bone Marrow (K562) 21756200
chr17 38718290 38720827 ZNF274 GTRD no Bone Marrow (K562) 108256792
chr17 38718290 38720827 ZNF274 GTRD no Bone Marrow (K562) 108256793
chr17 38718436 38720185 ZNF274 GTRD no Blood (GM12878) 21756219
chr17 38718436 38720185 ZNF274 GTRD no Blood (GM12878) 108256821
chr17 38718436 38720185 ZNF274 GTRD no Blood (GM12878) 108256822
chr17 38718479 38720989 TCF7L2 GTRD no Colon (HCT116) 21756226
chr17 38718479 38720989 TCF7L2 GTRD no Colon (HCT116) 108256833
chr17 38718479 38720989 TCF7L2 GTRD no Colon (HCT116) 108256834
chr17 38718534 38719860 ZNF274 GTRD no Liver (HepG2) 21756234
chr17 38718534 38719860 ZNF274 GTRD no Liver (HepG2) 108256845
chr17 38718534 38719860 ZNF274 GTRD no Liver (HepG2) 108256846
chr17 38719027 38721193 ZNF274 GTRD no Bone Marrow (K562) 21756251
chr17 38719027 38721193 ZNF274 GTRD no Bone Marrow (K562) 108256869
chr17 38719027 38721193 ZNF274 GTRD no Bone Marrow (K562) 108256870
chr17 38719045 38721101 ZNF274 GTRD no Bone Marrow (K562) 21756254
chr17 38719045 38721101 ZNF274 GTRD no Bone Marrow (K562) 108256875
chr17 38719045 38721101 ZNF274 GTRD no Bone Marrow (K562) 108256876
chr17 38719072 38719862 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21756257
chr17 38719072 38719862 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108256881
chr17 38719072 38719862 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108256882
chr17 38719129 38720943 TCF7L2 GTRD no Colon (HCT116) 21756260
chr17 38719129 38720943 TCF7L2 GTRD no Colon (HCT116) 108256886
chr17 38719129 38720943 TCF7L2 GTRD no Colon (HCT116) 108256887
chr17 38719190 38720977 TCF7L2 GTRD no Colon (HCT116) 21756263
chr17 38719190 38720977 TCF7L2 GTRD no Colon (HCT116) 108256890
chr17 38719193 38720907 TCF7L2 GTRD no Colon (HCT116) 21756264
chr17 38719193 38720907 TCF7L2 GTRD no Colon (HCT116) 108256891
chr17 38719222 38720603 ZNF274 GTRD no Bone Marrow (K562) 21756266
chr17 38719222 38720603 ZNF274 GTRD no Bone Marrow (K562) 108256893
chr17 38719227 38720907 TCF7L2 GTRD no Colon (HCT116) 21756267
chr17 38719227 38720907 TCF7L2 GTRD no Colon (HCT116) 108256894
chr17 38719299 38720718 TCF7L2 GTRD no Colon (HCT116) 21756270
chr17 38719299 38720718 TCF7L2 GTRD no Colon (HCT116) 108256897
chr17 38719322 38719912 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756272
chr17 38719322 38719912 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256899
chr17 38719322 38720868 TCF7L2 GTRD no Colon (HCT116) 21756273
chr17 38719322 38720868 TCF7L2 GTRD no Colon (HCT116) 108256900
chr17 38719378 38719869 TCF7L2 GTRD no Colon (HCT116) 21756274
chr17 38719378 38719869 TCF7L2 GTRD no Colon (HCT116) 108256901
chr17 38719460 38720491 ZNF274 GTRD no Bone Marrow (K562) 21756277
chr17 38719460 38720491 ZNF274 GTRD no Bone Marrow (K562) 108256904
chr17 38719472 38720367 ZNF274 GTRD no Bone Marrow (K562) 21756278
chr17 38719472 38720367 ZNF274 GTRD no Bone Marrow (K562) 108256905
chr17 38719504 38721238 ZNF274 GTRD no Bone Marrow (K562) 21756279
chr17 38719504 38721238 ZNF274 GTRD no Bone Marrow (K562) 108256906
chr17 38719555 38720625 ZNF274 GTRD no Bone Marrow (K562) 21756280
chr17 38719555 38720625 ZNF274 GTRD no Bone Marrow (K562) 108256907
chr17 38719587 38720103 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756281
chr17 38719587 38720103 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256908
chr17 38719588 38720108 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756282
chr17 38719588 38720108 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256909
chr17 38719593 38719933 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756283
chr17 38719593 38719933 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256910
chr17 38719638 38719948 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756284
chr17 38719638 38719948 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256911
chr17 38719660 38720261 ZBTB33 GTRD no Lung (A549) 108256912
chr17 38719660 38720511 ZNF274 GTRD no Bone Marrow (K562) 21756285
chr17 38719660 38720511 ZNF274 GTRD no Bone Marrow (K562) 108256913
chr17 38719670 38719852 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756286
chr17 38719670 38719852 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256914
chr17 38719673 38720455 ZNF274 GTRD no Bone Marrow (K562) 21756287
chr17 38719673 38720455 ZNF274 GTRD no Bone Marrow (K562) 108256915
chr17 38719675 38720655 ZNF274 GTRD no Bone Marrow (K562) 21756288
chr17 38719675 38720655 ZNF274 GTRD no Bone Marrow (K562) 108256916
chr17 38719685 38719999 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756289
chr17 38719685 38719999 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256917
chr17 38719688 38720522 ZNF274 GTRD no Bone Marrow (K562) 21756290
chr17 38719688 38720522 ZNF274 GTRD no Bone Marrow (K562) 108256918
chr17 38719690 38719874 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756291
chr17 38719690 38719874 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256919
chr17 38719696 38719999 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756292
chr17 38719696 38719999 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256920
chr17 38719702 38720740 ZNF274 GTRD no Bone Marrow (K562) 21756293
chr17 38719702 38720740 ZNF274 GTRD no Bone Marrow (K562) 108256921
chr17 38719724 38720276 ZNF274 GTRD no Bone Marrow (K562) 21756294
chr17 38719724 38720276 ZNF274 GTRD no Bone Marrow (K562) 108256922
chr17 38719725 38719874 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756295
chr17 38719725 38719874 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256923
chr17 38719736 38720120 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756296
chr17 38719736 38720120 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256924
chr17 38719737 38720479 ZNF274 GTRD no Bone Marrow (K562) 21756297
chr17 38719737 38720479 ZNF274 GTRD no Bone Marrow (K562) 108256925
chr17 38719750 38720252 ZNF274 GTRD no Bone Marrow (K562) 21756298
chr17 38719750 38720252 ZNF274 GTRD no Bone Marrow (K562) 108256926
chr17 38719764 38719778 IRF7 JASPAR yes 21236403
chr17 38719764 38719778 IRF7 JASPAR yes 54226895
chr17 38719771 38719783 HLF JASPAR yes 21236405
chr17 38719771 38719783 HLF JASPAR yes 54226897
chr17 38719773 38719781 NF-IL6 TRANSFAC yes 21236406
chr17 38719773 38719781 NF-IL6 TRANSFAC yes 54226898
chr17 38719778 38719781 MYB TRANSFAC yes 21236407
chr17 38719778 38719781 MYB TRANSFAC yes 54226899
Genes associated with rs140410580[chr17:38719778], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More