EnhancerDB
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  3. rs541626690[chr17:38719474]
Enhancers that have rs541626690[chr17:38719474]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 38719281 38720198 vista24741
VISTA
Transcript factors that have rs541626690[chr17:38719474]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756012
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256529
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256530
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256531
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256532
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256533
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256534
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256535
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256536
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256537
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256538
chr17 38718223 38719795 ZNF274 GTRD no Blood (GM12878) 21756185
chr17 38718223 38719795 ZNF274 GTRD no Blood (GM12878) 108256766
chr17 38718223 38719795 ZNF274 GTRD no Blood (GM12878) 108256767
chr17 38718256 38719580 ZBTB33 GTRD no Lung (A549) 108256775
chr17 38718256 38719580 ZBTB33 GTRD no Lung (A549) 108256776
chr17 38718276 38719544 ZNF274 GTRD no Bone Marrow (K562) 21756197
chr17 38718276 38719544 ZNF274 GTRD no Bone Marrow (K562) 108256785
chr17 38718276 38719544 ZNF274 GTRD no Bone Marrow (K562) 108256786
chr17 38718277 38719584 ZBTB33 GTRD no Lung (A549) 108256787
chr17 38718277 38719584 ZBTB33 GTRD no Lung (A549) 108256788
chr17 38718282 38720793 TCF7L2 GTRD no Colon (HCT116) 21756198
chr17 38718282 38720793 TCF7L2 GTRD no Colon (HCT116) 108256789
chr17 38718282 38720793 TCF7L2 GTRD no Colon (HCT116) 108256790
chr17 38718290 38720827 ZNF274 GTRD no Bone Marrow (K562) 21756200
chr17 38718290 38720827 ZNF274 GTRD no Bone Marrow (K562) 108256792
chr17 38718290 38720827 ZNF274 GTRD no Bone Marrow (K562) 108256793
chr17 38718331 38719501 ZBTB33 GTRD no Lung (A549) 108256802
chr17 38718331 38719501 ZBTB33 GTRD no Lung (A549) 108256803
chr17 38718358 38719598 ZNF274 GTRD no Blood (GM12878) 21756212
chr17 38718358 38719598 ZNF274 GTRD no Blood (GM12878) 108256811
chr17 38718358 38719598 ZNF274 GTRD no Blood (GM12878) 108256812
chr17 38718425 38719486 ZNF274 GTRD no Liver (HepG2) 21756218
chr17 38718425 38719486 ZNF274 GTRD no Liver (HepG2) 108256818
chr17 38718425 38719486 ZNF274 GTRD no Liver (HepG2) 108256819
chr17 38718436 38720185 ZNF274 GTRD no Blood (GM12878) 21756219
chr17 38718436 38720185 ZNF274 GTRD no Blood (GM12878) 108256821
chr17 38718436 38720185 ZNF274 GTRD no Blood (GM12878) 108256822
chr17 38718479 38720989 TCF7L2 GTRD no Colon (HCT116) 21756226
chr17 38718479 38720989 TCF7L2 GTRD no Colon (HCT116) 108256833
chr17 38718479 38720989 TCF7L2 GTRD no Colon (HCT116) 108256834
chr17 38718534 38719860 ZNF274 GTRD no Liver (HepG2) 21756234
chr17 38718534 38719860 ZNF274 GTRD no Liver (HepG2) 108256845
chr17 38718534 38719860 ZNF274 GTRD no Liver (HepG2) 108256846
chr17 38718537 38719643 ZBTB33 GTRD no Lung (A549) 108256847
chr17 38718537 38719643 ZBTB33 GTRD no Lung (A549) 108256848
chr17 38718982 38719482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756249
chr17 38718982 38719482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256865
chr17 38718982 38719482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256866
chr17 38719027 38721193 ZNF274 GTRD no Bone Marrow (K562) 21756251
chr17 38719027 38721193 ZNF274 GTRD no Bone Marrow (K562) 108256869
chr17 38719027 38721193 ZNF274 GTRD no Bone Marrow (K562) 108256870
chr17 38719045 38721101 ZNF274 GTRD no Bone Marrow (K562) 21756254
chr17 38719045 38721101 ZNF274 GTRD no Bone Marrow (K562) 108256875
chr17 38719045 38721101 ZNF274 GTRD no Bone Marrow (K562) 108256876
chr17 38719056 38719492 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756255
chr17 38719056 38719492 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256877
chr17 38719056 38719492 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256878
chr17 38719063 38719599 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756256
chr17 38719063 38719599 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256879
chr17 38719063 38719599 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256880
chr17 38719072 38719862 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21756257
chr17 38719072 38719862 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108256881
chr17 38719072 38719862 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108256882
chr17 38719095 38719531 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756258
chr17 38719095 38719531 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256883
chr17 38719095 38719531 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256884
chr17 38719129 38720943 TCF7L2 GTRD no Colon (HCT116) 21756260
chr17 38719129 38720943 TCF7L2 GTRD no Colon (HCT116) 108256886
chr17 38719129 38720943 TCF7L2 GTRD no Colon (HCT116) 108256887
chr17 38719174 38719636 ZNF274 GTRD no Bone Marrow (K562) 21756261
chr17 38719174 38719636 ZNF274 GTRD no Bone Marrow (K562) 108256888
chr17 38719181 38719681 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756262
chr17 38719181 38719681 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256889
chr17 38719190 38720977 TCF7L2 GTRD no Colon (HCT116) 21756263
chr17 38719190 38720977 TCF7L2 GTRD no Colon (HCT116) 108256890
chr17 38719193 38720907 TCF7L2 GTRD no Colon (HCT116) 21756264
chr17 38719193 38720907 TCF7L2 GTRD no Colon (HCT116) 108256891
chr17 38719214 38719614 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756265
chr17 38719214 38719614 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256892
chr17 38719222 38720603 ZNF274 GTRD no Bone Marrow (K562) 21756266
chr17 38719222 38720603 ZNF274 GTRD no Bone Marrow (K562) 108256893
chr17 38719227 38720907 TCF7L2 GTRD no Colon (HCT116) 21756267
chr17 38719227 38720907 TCF7L2 GTRD no Colon (HCT116) 108256894
chr17 38719272 38719711 ZNF274 GTRD no Bone Marrow (K562) 21756268
chr17 38719272 38719711 ZNF274 GTRD no Bone Marrow (K562) 108256895
chr17 38719299 38720718 TCF7L2 GTRD no Colon (HCT116) 21756270
chr17 38719299 38720718 TCF7L2 GTRD no Colon (HCT116) 108256897
chr17 38719314 38719674 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756271
chr17 38719314 38719674 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256898
chr17 38719322 38719912 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756272
chr17 38719322 38719912 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256899
chr17 38719322 38720868 TCF7L2 GTRD no Colon (HCT116) 21756273
chr17 38719322 38720868 TCF7L2 GTRD no Colon (HCT116) 108256900
chr17 38719378 38719869 TCF7L2 GTRD no Colon (HCT116) 21756274
chr17 38719378 38719869 TCF7L2 GTRD no Colon (HCT116) 108256901
chr17 38719390 38719620 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21756275
chr17 38719390 38719620 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108256902
chr17 38719395 38719619 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21756276
chr17 38719395 38719619 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108256903
chr17 38719460 38720491 ZNF274 GTRD no Bone Marrow (K562) 21756277
chr17 38719460 38720491 ZNF274 GTRD no Bone Marrow (K562) 108256904
chr17 38719472 38720367 ZNF274 GTRD no Bone Marrow (K562) 21756278
chr17 38719472 38720367 ZNF274 GTRD no Bone Marrow (K562) 108256905
Genes associated with rs541626690[chr17:38719474], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More