EnhancerDB
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  3. vista24794[chr17:39822130-39822941]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24794[chr17:39822130-39822941]
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Tissue distribution of vista24794
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Transcription factor that possibly regulate vista24794[chr17:39822130-39822941]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 39821894 39822905 POLR2A UCSC Txn Factor no Conserved 108259260
chr17 39821989 39822343 PHF8 UCSC Txn Factor no Conserved 108259280
chr17 39822104 39822541 CTCF UCSC Txn Factor no Conserved 108259313
chr17 39822209 39822506 NRF1 UCSC Txn Factor no Conserved 108259357
chr17 39822548 39822837 ELF1 UCSC Txn Factor no Conserved 108259382
chr17 39822132 39822144 TAL1 JASPAR yes 21238953
chr17 39822132 39822144 TAL1 JASPAR yes 54270413
chr17 39822152 39822167 RUNX2 JASPAR yes 21238954
chr17 39822152 39822167 RUNX2 JASPAR yes 54270414
chr17 39822153 39822169 ZNF143 JASPAR yes 21238955
chr17 39822153 39822169 ZNF143 JASPAR yes 54270415
chr17 39822173 39822193 RREB1 JASPAR yes 21238956
chr17 39822173 39822193 RREB1 JASPAR yes 54270416
chr17 39822196 39822204 MEIS2 JASPAR yes 21238957
chr17 39822196 39822204 MEIS3 JASPAR yes 21238958
chr17 39822196 39822204 MEIS2 JASPAR yes 54270417
chr17 39822196 39822204 MEIS3 JASPAR yes 54270418
chr17 39822197 39822209 PKNOX1 JASPAR yes 21238959
chr17 39822197 39822209 PKNOX2 JASPAR yes 21238960
chr17 39822197 39822209 TGIF1 JASPAR yes 21238961
chr17 39822197 39822209 TGIF2 JASPAR yes 21238962
chr17 39822197 39822209 PKNOX1 JASPAR yes 54270419
chr17 39822197 39822209 PKNOX2 JASPAR yes 54270420
chr17 39822197 39822209 TGIF1 JASPAR yes 54270421
chr17 39822197 39822209 TGIF2 JASPAR yes 54270422
chr17 39822198 39822208 MSC JASPAR yes 21238963
chr17 39822198 39822208 MYF6 JASPAR yes 21238964
chr17 39822198 39822208 MSC JASPAR yes 54270423
chr17 39822198 39822208 MYF6 JASPAR yes 54270424
chr17 39822203 39822212 THAP1 JASPAR yes 21238965
chr17 39822203 39822212 THAP1 JASPAR yes 54270425
chr17 39822210 39822220 GCM2 JASPAR yes 21238966
chr17 39822210 39822220 GCM2 JASPAR yes 54270426
chr17 39822220 39822226 MZF1 JASPAR yes 21238967
chr17 39822220 39822226 MZF1 JASPAR yes 54270427
chr17 39822220 39822241 ZNF263 JASPAR yes 21238968
chr17 39822220 39822241 ZNF263 JASPAR yes 54270428
chr17 39822231 39822241 SP1 JASPAR yes 21238969
chr17 39822231 39822241 SP1 JASPAR yes 54270429
chr17 39822265 39822284 PAX5 JASPAR yes 21238970
chr17 39822265 39822284 PAX5 JASPAR yes 54270430
chr17 39822275 39822280 SP1 TRANSFAC yes 21238971
chr17 39822275 39822280 SP1 TRANSFAC yes 54270431
chr17 39822296 39822315 REST JASPAR yes 21238972
chr17 39822296 39822315 REST JASPAR yes 54270432
chr17 39822300 39822310 SP1 JASPAR yes 21238973
chr17 39822300 39822310 SP1 JASPAR yes 54270433
chr17 39822307 39822321 MTF1 JASPAR yes 21238974
chr17 39822307 39822321 MTF1 JASPAR yes 54270434
chr17 39822315 39822334 CTCF JASPAR yes 21238975
chr17 39822315 39822334 CTCF JASPAR yes 54270435
chr17 39822341 39822355 ZIC1 JASPAR yes 21238976
chr17 39822341 39822355 ZIC1 JASPAR yes 54270436
chr17 39822341 39822356 ZIC3 JASPAR yes 21238977
chr17 39822341 39822356 ZIC3 JASPAR yes 54270437
chr17 39822351 39822362 NRF1 JASPAR yes 21238978
chr17 39822351 39822362 NRF1 JASPAR yes 54270438
chr17 39822352 39822363 NRF1 JASPAR yes 21238979
chr17 39822352 39822363 NRF1 JASPAR yes 54270439
chr17 39822405 39822410 SP1 TRANSFAC yes 21238980
chr17 39822405 39822410 SP1 TRANSFAC yes 54270440
chr17 39822405 39822416 NFKB1 JASPAR yes 21238981
chr17 39822405 39822416 NFKB1 JASPAR yes 54270441
chr17 39822449 39822464 HNF4A JASPAR yes 21238982
chr17 39822449 39822464 HNF4A JASPAR yes 54270442
chr17 39822450 39822465 HNF4G JASPAR yes 21238983
chr17 39822450 39822465 HNF4G JASPAR yes 54270443
chr17 39822457 39822467 RORA JASPAR yes 21238984
chr17 39822457 39822467 RORA JASPAR yes 54270444
chr17 39822474 39822480 SOX10 JASPAR yes 21238985
chr17 39822474 39822480 SOX10 JASPAR yes 54270445
chr17 39822478 39822499 ZNF263 JASPAR yes 21238986
chr17 39822478 39822499 ZNF263 JASPAR yes 54270446
chr17 39822479 39822500 ZNF263 JASPAR yes 21238987
chr17 39822479 39822500 ZNF263 JASPAR yes 54270447
chr17 39822480 39822488 EHF JASPAR yes 21238988
chr17 39822480 39822488 EHF JASPAR yes 54270448
chr17 39822481 39822502 ZNF263 JASPAR yes 21238989
chr17 39822481 39822502 ZNF263 JASPAR yes 54270449
chr17 39822482 39822489 SPIB JASPAR yes 21238990
chr17 39822482 39822489 SPIB JASPAR yes 54270450
chr17 39822495 39822507 INSM1 JASPAR yes 21238991
chr17 39822495 39822507 INSM1 JASPAR yes 54270451
chr17 39822508 39822512 YY1 TRANSFAC yes 21238992
chr17 39822508 39822512 YY1 TRANSFAC yes 54270452
chr17 39822521 39822531 BARHL2 JASPAR yes 21238993
chr17 39822521 39822531 BARHL2 JASPAR yes 54270453
chr17 39822530 39822550 TP63 JASPAR yes 21238994
chr17 39822530 39822550 TP63 JASPAR yes 54270454
chr17 39822530 39822551 ZNF263 JASPAR yes 21238995
chr17 39822530 39822551 ZNF263 JASPAR yes 54270455
chr17 39822548 39822554 MYC TRANSFAC yes 21238996
chr17 39822548 39822554 MYC TRANSFAC yes 54270456
chr17 39822557 39822576 CTCF JASPAR yes 21238997
chr17 39822557 39822576 CTCF JASPAR yes 54270457
chr17 39822562 39822572 FIGLA JASPAR yes 21238998
chr17 39822562 39822572 TCF4 JASPAR yes 21238999
chr17 39822562 39822572 FIGLA JASPAR yes 54270458
chr17 39822562 39822572 TCF4 JASPAR yes 54270459
chr17 39822564 39822573 ZEB1 JASPAR yes 21239000
chr17 39822564 39822573 ZEB1 JASPAR yes 54270460
chr17 39822566 39822571 SP1 TRANSFAC yes 21239001
chr17 39822566 39822571 SP1 TRANSFAC yes 54270461
chr17 39822582 39822601 REST JASPAR yes 21239002
chr17 39822582 39822601 REST JASPAR yes 54270462
chr17 39822585 39822596 GCM1 JASPAR yes 21239003
chr17 39822585 39822596 GCM1 JASPAR yes 54270463
chr17 39822606 39822618 MEF2A JASPAR yes 21239004
chr17 39822606 39822618 MEF2B JASPAR yes 21239005
chr17 39822606 39822618 MEF2D JASPAR yes 21239006
chr17 39822606 39822618 MEF2A JASPAR yes 54270464
chr17 39822606 39822618 MEF2B JASPAR yes 54270465
chr17 39822606 39822618 MEF2D JASPAR yes 54270466
chr17 39822607 39822617 MEF2A JASPAR yes 21239007
chr17 39822607 39822617 MEF2A JASPAR yes 54270467
chr17 39822609 39822621 MEF2A JASPAR yes 21239008
chr17 39822609 39822621 MEF2B JASPAR yes 21239009
chr17 39822609 39822621 MEF2D JASPAR yes 21239010
chr17 39822609 39822621 MEF2A JASPAR yes 54270468
chr17 39822609 39822621 MEF2B JASPAR yes 54270469
chr17 39822609 39822621 MEF2D JASPAR yes 54270470
chr17 39822617 39822620 MYB TRANSFAC yes 21239011
chr17 39822617 39822620 MYB TRANSFAC yes 54270471
chr17 39822626 39822640 BATF3 JASPAR yes 21239012
chr17 39822626 39822640 BATF3 JASPAR yes 54270472
chr17 39822632 39822644 NHLH1 JASPAR yes 21239013
chr17 39822632 39822644 NHLH1 JASPAR yes 54270473
chr17 39822633 39822643 NHLH1 JASPAR yes 21239014
chr17 39822633 39822643 NHLH1 JASPAR yes 54270474
chr17 39822647 39822656 HIC2 JASPAR yes 21239015
chr17 39822647 39822656 HIC2 JASPAR yes 54270475
chr17 39822650 39822654 LFA1 TRANSFAC yes 21239016
chr17 39822650 39822654 LFA1 TRANSFAC yes 54270476
chr17 39822652 39822667 RUNX2 JASPAR yes 21239017
chr17 39822652 39822667 RUNX2 JASPAR yes 54270477
chr17 39822655 39822661 SOX10 JASPAR yes 21239018
chr17 39822655 39822661 SOX10 JASPAR yes 54270478
chr17 39822655 39822666 RUNX1 JASPAR yes 21239019
chr17 39822655 39822666 RUNX1 JASPAR yes 54270479
chr17 39822656 39822666 RUNX3 JASPAR yes 21239020
chr17 39822656 39822666 RUNX3 JASPAR yes 54270480
chr17 39822657 39822666 RUNX2 JASPAR yes 21239021
chr17 39822657 39822666 RUNX2 JASPAR yes 54270481
chr17 39822657 39822676 RFX2 JASPAR yes 21239022
chr17 39822657 39822676 RFX2 JASPAR yes 54270482
chr17 39822661 39822677 RFX2 JASPAR yes 21239023
chr17 39822661 39822677 RFX3 JASPAR yes 21239024
chr17 39822661 39822677 RFX4 JASPAR yes 21239025
chr17 39822661 39822677 RFX5 JASPAR yes 21239026
chr17 39822661 39822677 RFX2 JASPAR yes 54270483
chr17 39822661 39822677 RFX3 JASPAR yes 54270484
chr17 39822661 39822677 RFX4 JASPAR yes 54270485
chr17 39822661 39822677 RFX5 JASPAR yes 54270486
chr17 39822662 39822681 RFX2 JASPAR yes 21239027
chr17 39822662 39822681 RFX2 JASPAR yes 54270487
chr17 39822683 39822696 ELF1 JASPAR yes 21239028
chr17 39822683 39822696 ELF1 JASPAR yes 54270488
chr17 39822684 39822696 EHF JASPAR yes 21239029
chr17 39822684 39822696 ELF1 JASPAR yes 21239030
chr17 39822684 39822696 ELF4 JASPAR yes 21239031
chr17 39822684 39822696 EHF JASPAR yes 54270489
chr17 39822684 39822696 ELF1 JASPAR yes 54270490
chr17 39822684 39822696 ELF4 JASPAR yes 54270491
chr17 39822684 39822697 ELF3 JASPAR yes 21239032
chr17 39822684 39822697 ELF3 JASPAR yes 54270492
chr17 39822685 39822696 ELF5 JASPAR yes 21239033
chr17 39822685 39822696 ELF5 JASPAR yes 54270493
chr17 39822686 39822693 ETS1 TRANSFAC yes 21239034
chr17 39822686 39822693 ETS1 TRANSFAC yes 54270494
chr17 39822686 39822696 ETV6 JASPAR yes 21239035
chr17 39822686 39822696 GABPA JASPAR yes 21239036
chr17 39822686 39822696 ETV6 JASPAR yes 54270495
chr17 39822686 39822696 GABPA JASPAR yes 54270496
chr17 39822686 39822697 ELK4 JASPAR yes 21239037
chr17 39822686 39822697 FLI1 JASPAR yes 21239038
chr17 39822686 39822697 ELK4 JASPAR yes 54270497
chr17 39822686 39822697 FLI1 JASPAR yes 54270498
chr17 39822687 39822695 EHF JASPAR yes 21239039
chr17 39822687 39822695 FEV JASPAR yes 21239040
chr17 39822687 39822695 EHF JASPAR yes 54270499
chr17 39822687 39822695 FEV JASPAR yes 54270500
chr17 39822688 39822695 SPI1 JASPAR yes 21239041
chr17 39822688 39822695 SPI1 JASPAR yes 54270501
chr17 39822711 39822722 E2F1 JASPAR yes 21239042
chr17 39822711 39822722 E2F1 JASPAR yes 54270502
chr17 39822712 39822717 SP1 TRANSFAC yes 21239043
chr17 39822712 39822717 SP1 TRANSFAC yes 54270503
chr17 39822716 39822726 NHLH1 JASPAR yes 21239044
chr17 39822716 39822726 NHLH1 JASPAR yes 54270504
chr17 39822738 39822751 NFKB1 JASPAR yes 21239045
chr17 39822738 39822751 NFKB2 JASPAR yes 21239046
chr17 39822738 39822751 NFKB1 JASPAR yes 54270505
chr17 39822738 39822751 NFKB2 JASPAR yes 54270506
chr17 39822739 39822749 NFKB1 JASPAR yes 21239047
chr17 39822739 39822749 REL JASPAR yes 21239048
chr17 39822739 39822749 NFKB1 JASPAR yes 54270507
chr17 39822739 39822749 REL JASPAR yes 54270508
chr17 39822739 39822750 NFKB1 JASPAR yes 21239049
chr17 39822739 39822750 NFKB1 JASPAR yes 54270509
chr17 39822740 39822750 NFKB1 JASPAR yes 21239050
chr17 39822740 39822750 RELA JASPAR yes 21239051
chr17 39822740 39822750 NFKB1 JASPAR yes 54270510
chr17 39822740 39822750 RELA JASPAR yes 54270511
chr17 39822740 39822751 NFKB1 JASPAR yes 21239052
chr17 39822740 39822751 NFKB1 JASPAR yes 54270512
chr17 39822740 39822757 RARA JASPAR yes 21239053
chr17 39822740 39822757 RARA JASPAR yes 54270513
chr17 39822748 39822759 ESRRA JASPAR yes 21239054
chr17 39822748 39822759 ESRRB JASPAR yes 21239055
chr17 39822748 39822759 ESRRA JASPAR yes 54270514
chr17 39822748 39822759 ESRRB JASPAR yes 54270515
chr17 39822748 39822761 NR2F1 JASPAR yes 21239056
chr17 39822748 39822761 NR2F1 JASPAR yes 54270516
chr17 39822750 39822758 NR4A2 JASPAR yes 21239057
chr17 39822750 39822758 NR4A2 JASPAR yes 54270517
chr17 39822752 39822756 ESR1 TRANSFAC yes 21239058
chr17 39822752 39822756 ESR1 TRANSFAC yes 54270518
chr17 39822782 39822792 REL JASPAR yes 21239059
chr17 39822782 39822792 REL JASPAR yes 54270519
chr17 39822785 39822796 FOXA1 JASPAR yes 21239060
chr17 39822785 39822796 FOXA1 JASPAR yes 54270520
chr17 39822788 39822795 SPIB JASPAR yes 21239061
chr17 39822788 39822795 SPIB JASPAR yes 54270521
chr17 39822794 39822808 CREB3L1 JASPAR yes 21239062
chr17 39822794 39822808 CREB3L1 JASPAR yes 54270522
chr17 39822808 39822811 MYB TRANSFAC yes 21239063
chr17 39822808 39822811 MYB TRANSFAC yes 54270523
chr17 39822810 39822820 SP1 JASPAR yes 21239064
chr17 39822810 39822820 SP1 JASPAR yes 54270524
chr17 39822811 39822821 SP1 JASPAR yes 21239065
chr17 39822811 39822821 SP1 JASPAR yes 54270525
chr17 39822828 39822833 SP1 TRANSFAC yes 21239066
chr17 39822828 39822833 SP1 TRANSFAC yes 54270526
chr17 39822857 39822876 RFX2 JASPAR yes 21239067
chr17 39822857 39822876 RFX2 JASPAR yes 54270527
chr17 39822860 39822870 ELK1 JASPAR yes 21239068
chr17 39822860 39822870 ELK1 JASPAR yes 54270528
chr17 39822864 39822870 ETS1 JASPAR yes 21239069
chr17 39822864 39822870 ETS1 JASPAR yes 54270529
chr17 39822864 39822875 NFKB1 JASPAR yes 21239070
chr17 39822864 39822875 NFKB1 JASPAR yes 54270530
chr17 39822865 39822875 RELA JASPAR yes 21239071
chr17 39822865 39822875 REL JASPAR yes 21239072
chr17 39822865 39822875 RELA JASPAR yes 54270531
chr17 39822865 39822875 REL JASPAR yes 54270532
chr17 39822867 39822887 RREB1 JASPAR yes 21239073
chr17 39822867 39822887 RREB1 JASPAR yes 54270533
chr17 39822868 39822888 RREB1 JASPAR yes 21239074
chr17 39822868 39822888 RREB1 JASPAR yes 54270534
chr17 39822869 39822879 SP1 JASPAR yes 21239075
chr17 39822869 39822879 SP1 JASPAR yes 54270535
chr17 39822869 39822889 RREB1 JASPAR yes 21239076
chr17 39822869 39822889 RREB1 JASPAR yes 54270536
chr17 39822870 39822880 SP1 JASPAR yes 21239077
chr17 39822870 39822880 SP1 JASPAR yes 54270537
chr17 39822870 39822890 RREB1 JASPAR yes 21239078
chr17 39822870 39822890 RREB1 JASPAR yes 54270538
chr17 39822871 39822891 RREB1 JASPAR yes 21239079
chr17 39822871 39822891 RREB1 JASPAR yes 54270539
chr17 39822871 39822892 ZNF263 JASPAR yes 21239080
chr17 39822871 39822892 ZNF263 JASPAR yes 54270540
chr17 39822872 39822882 ZNF740 JASPAR yes 21239081
chr17 39822872 39822882 ZNF740 JASPAR yes 54270541
chr17 39822873 39822893 RREB1 JASPAR yes 21239082
chr17 39822873 39822893 RREB1 JASPAR yes 54270542
chr17 39822875 39822896 ZNF263 JASPAR yes 21239083
chr17 39822875 39822896 ZNF263 JASPAR yes 54270543
chr17 39822876 39822886 SP1 JASPAR yes 21239084
chr17 39822876 39822886 SP1 JASPAR yes 54270544
chr17 39822878 39822888 ZNF740 JASPAR yes 21239085
chr17 39822878 39822888 ZNF740 JASPAR yes 54270545
chr17 39822892 39822903 NRF1 JASPAR yes 21239086
chr17 39822892 39822903 NRF1 JASPAR yes 54270546
chr17 39822916 39822920 YY1 TRANSFAC yes 21239087
chr17 39822916 39822920 YY1 TRANSFAC yes 54270547
chr17 39822917 39822925 FEV JASPAR yes 21239088
chr17 39822917 39822925 FEV JASPAR yes 54270548
chr17 39822922 39822926 NFE TRANSFAC yes 21239089
chr17 39822922 39822926 NFE TRANSFAC yes 54270549
chr17 39822932 39822949 ZNF410 JASPAR yes 21239090
chr17 39822932 39822949 ZNF410 JASPAR yes 54270550
SNP sites on vista24794[chr17:39822130-39822941]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 39822142 rs79546747 T C
CTCF PHF8 POLR2A TAL1
4874331
chr17 39822174 rs73297970 A G
CTCF PHF8 POLR2A RREB1
4874332
chr17 39822240 rs556384341 C G
CTCF NRF1 PHF8 POLR2A SP1 ZNF263
4874333
chr17 39822334 rs150891166 G A,C
CTCF NRF1 PHF8 POLR2A
4874334
chr17 39822427 rs184804802 C G
CTCF NRF1 POLR2A
4874335
chr17 39822430 rs542722581 G T
CTCF NRF1 POLR2A
4874336
chr17 39822434 rs73297972 C G
CTCF NRF1 POLR2A
4874337
chr17 39822532 rs150071030 C G
CTCF POLR2A TP63 ZNF263
4874338
chr17 39822667 rs8071016 C T
ELF1 POLR2A RFX2 RFX3 RFX4 RFX5 RUNX2
4874339
chr17 39822742 rs186502840 G A
ELF1 NFKB1 NFKB2 POLR2A RARA REL RELA
4874340
chr17 39822866 rs8070240 G A
ELK1 ETS1 NFKB1 POLR2A REL RELA RFX2
4874341
Genes possibly regulated by vista24794[chr17:39822130-39822941]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 39722096 39728310 - KRT9 ENSG00000171403.5 39728310 0.99 1.0 15832 6180
chr17 39738531 39743173 - KRT14 ENSG00000186847.5 39743173 1.0 0.99 15833 21043
chr17 39766030 39772151 - KRT16 ENSG00000186832.4 39772151 0.99 1.0 15834 50021
chr17 39775689 39781094 - KRT17 ENSG00000128422.11 39781094 1.0 1.0 15835 58964
chr17 39845137 39848920 + EIF1 ENSG00000173812.6 39845137 0.55 1.0 15837 77804
chr17 39868578 39872221 + GAST ENSG00000184502.3 39868578 0.98 1.0 15838 54363
chr17 39873994 39890896 - HAP1 ENSG00000173805.11 39890896 0.9 1.0 15839 32045
Expression level of Genes
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miRNAs possibly regulated by vista24794[chr17:39822130-39822941]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results