EnhancerDB
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Enhancers that have rs8071016[chr17:39822667]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
chr17 39822130 39822941 vista24794
VISTA
Transcript factors that have rs8071016[chr17:39822667]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 21758082
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 108259243
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 21758083
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 108259244
chr17 39821730 39822672 ZNF274 GTRD no Blood (GM12878) 21758087
chr17 39821730 39822672 ZNF274 GTRD no Blood (GM12878) 108259249
chr17 39821752 39822707 ZNF274 GTRD no Blood (GM12878) 21758088
chr17 39821752 39822707 ZNF274 GTRD no Blood (GM12878) 108259250
chr17 39821894 39822905 POLR2A UCSC Txn Factor no Conserved 108259260
chr17 39821998 39822682 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758113
chr17 39821998 39822682 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259287
chr17 39822168 39822672 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108259340
chr17 39822462 39822782 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758169
chr17 39822462 39822782 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259377
chr17 39822489 39822729 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108259378
chr17 39822514 39822790 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108259379
chr17 39822533 39822917 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758170
chr17 39822533 39822917 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259380
chr17 39822548 39822824 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108259381
chr17 39822548 39822837 ELF1 UCSC Txn Factor no Conserved 108259382
chr17 39822552 39822856 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758171
chr17 39822552 39822856 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259383
chr17 39822577 39822837 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758172
chr17 39822577 39822837 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259384
chr17 39822585 39822915 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758173
chr17 39822585 39822915 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259385
chr17 39822588 39822748 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758174
chr17 39822588 39822748 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259386
chr17 39822625 39822783 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21758175
chr17 39822625 39822783 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108259387
chr17 39822652 39822667 RUNX2 JASPAR yes 21239017
chr17 39822652 39822667 RUNX2 JASPAR yes 54270477
chr17 39822657 39822676 RFX2 JASPAR yes 21239022
chr17 39822657 39822676 RFX2 JASPAR yes 54270482
chr17 39822658 39822737 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758176
chr17 39822658 39822737 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259388
chr17 39822661 39822677 RFX2 JASPAR yes 21239023
chr17 39822661 39822677 RFX3 JASPAR yes 21239024
chr17 39822661 39822677 RFX4 JASPAR yes 21239025
chr17 39822661 39822677 RFX5 JASPAR yes 21239026
chr17 39822661 39822677 RFX2 JASPAR yes 54270483
chr17 39822661 39822677 RFX3 JASPAR yes 54270484
chr17 39822661 39822677 RFX4 JASPAR yes 54270485
chr17 39822661 39822677 RFX5 JASPAR yes 54270486
chr17 39822662 39822681 RFX2 JASPAR yes 21239027
chr17 39822662 39822681 RFX2 JASPAR yes 54270487
chr17 39822666 39822744 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758177
chr17 39822666 39822744 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259389
Genes associated with rs8071016[chr17:39822667], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 39078948 39093886 - KRT23 ENSG00000108244.12 39093886 728781 Esophagus 0.288824 15783