EnhancerDB
  1. Home
  2. SNP
  3. rs186502840[chr17:39822742]
Enhancers that have rs186502840[chr17:39822742]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
chr17 39822130 39822941 vista24794
VISTA
Transcript factors that have rs186502840[chr17:39822742]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39821894 39822905 POLR2A UCSC Txn Factor no Conserved 108259260
chr17 39822462 39822782 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758169
chr17 39822462 39822782 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259377
chr17 39822514 39822790 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108259379
chr17 39822533 39822917 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758170
chr17 39822533 39822917 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259380
chr17 39822548 39822824 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108259381
chr17 39822548 39822837 ELF1 UCSC Txn Factor no Conserved 108259382
chr17 39822552 39822856 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758171
chr17 39822552 39822856 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259383
chr17 39822577 39822837 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758172
chr17 39822577 39822837 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259384
chr17 39822585 39822915 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758173
chr17 39822585 39822915 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259385
chr17 39822588 39822748 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758174
chr17 39822588 39822748 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259386
chr17 39822625 39822783 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21758175
chr17 39822625 39822783 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108259387
chr17 39822666 39822744 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758177
chr17 39822666 39822744 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259389
chr17 39822738 39822751 NFKB1 JASPAR yes 21239045
chr17 39822738 39822751 NFKB2 JASPAR yes 21239046
chr17 39822738 39822751 NFKB1 JASPAR yes 54270505
chr17 39822738 39822751 NFKB2 JASPAR yes 54270506
chr17 39822739 39822749 NFKB1 JASPAR yes 21239047
chr17 39822739 39822749 REL JASPAR yes 21239048
chr17 39822739 39822749 NFKB1 JASPAR yes 54270507
chr17 39822739 39822749 REL JASPAR yes 54270508
chr17 39822739 39822750 NFKB1 JASPAR yes 21239049
chr17 39822739 39822750 NFKB1 JASPAR yes 54270509
chr17 39822740 39822750 NFKB1 JASPAR yes 21239050
chr17 39822740 39822750 RELA JASPAR yes 21239051
chr17 39822740 39822750 NFKB1 JASPAR yes 54270510
chr17 39822740 39822750 RELA JASPAR yes 54270511
chr17 39822740 39822751 NFKB1 JASPAR yes 21239052
chr17 39822740 39822751 NFKB1 JASPAR yes 54270512
chr17 39822740 39822757 RARA JASPAR yes 21239053
chr17 39822740 39822757 RARA JASPAR yes 54270513
Genes associated with rs186502840[chr17:39822742], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More