EnhancerDB
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  3. vista25055[chr17:47098330-47098693]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25055[chr17:47098330-47098693]
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Tissue distribution of vista25055
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Transcription factor that possibly regulate vista25055[chr17:47098330-47098693]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 47098327 47098348 IRF1 JASPAR yes 21251453
chr17 47098327 47098348 IRF1 JASPAR yes 54609582
chr17 47098328 47098349 IRF1 JASPAR yes 21251454
chr17 47098328 47098349 IRF1 JASPAR yes 54609583
chr17 47098329 47098344 FOXP1 JASPAR yes 21251455
chr17 47098329 47098344 FOXP1 JASPAR yes 54609584
chr17 47098330 47098345 FOXP1 JASPAR yes 21251456
chr17 47098330 47098345 FOXP1 JASPAR yes 54609585
chr17 47098331 47098337 TBP TRANSFAC yes 21251457
chr17 47098331 47098337 TBP TRANSFAC yes 54609586
chr17 47098331 47098346 FOXP1 JASPAR yes 21251458
chr17 47098331 47098346 FOXP1 JASPAR yes 54609587
chr17 47098331 47098352 IRF1 JASPAR yes 21251459
chr17 47098331 47098352 IRF1 JASPAR yes 54609588
chr17 47098332 47098347 FOXP1 JASPAR yes 21251460
chr17 47098332 47098347 FOXP1 JASPAR yes 54609589
chr17 47098332 47098353 IRF1 JASPAR yes 21251461
chr17 47098332 47098353 IRF1 JASPAR yes 54609590
chr17 47098333 47098348 FOXP1 JASPAR yes 21251462
chr17 47098333 47098348 FOXP1 JASPAR yes 54609591
chr17 47098333 47098354 IRF1 JASPAR yes 21251463
chr17 47098333 47098354 IRF1 JASPAR yes 54609592
chr17 47098334 47098349 FOXP1 JASPAR yes 21251464
chr17 47098334 47098349 FOXP1 JASPAR yes 54609593
chr17 47098335 47098350 FOXP1 JASPAR yes 21251465
chr17 47098335 47098350 FOXP1 JASPAR yes 54609594
chr17 47098335 47098356 IRF1 JASPAR yes 21251466
chr17 47098335 47098356 IRF1 JASPAR yes 54609595
chr17 47098336 47098351 FOXP1 JASPAR yes 21251467
chr17 47098336 47098351 FOXP1 JASPAR yes 54609596
chr17 47098336 47098357 IRF1 JASPAR yes 21251468
chr17 47098336 47098357 IRF1 JASPAR yes 54609597
chr17 47098337 47098352 FOXP1 JASPAR yes 21251469
chr17 47098337 47098352 FOXP1 JASPAR yes 54609598
chr17 47098359 47098379 TP63 JASPAR yes 21251470
chr17 47098359 47098379 TP63 JASPAR yes 54609599
chr17 47098360 47098378 TP63 JASPAR yes 21251471
chr17 47098360 47098378 TP73 JASPAR yes 21251472
chr17 47098360 47098378 TP63 JASPAR yes 54609600
chr17 47098360 47098378 TP73 JASPAR yes 54609601
chr17 47098365 47098371 YY1 JASPAR yes 21251473
chr17 47098365 47098371 YY1 JASPAR yes 54609602
chr17 47098368 47098379 NRF1 JASPAR yes 21251474
chr17 47098368 47098379 NRF1 JASPAR yes 54609603
chr17 47098369 47098380 NRF1 JASPAR yes 21251475
chr17 47098369 47098380 NRF1 JASPAR yes 54609604
chr17 47098371 47098381 MAX JASPAR yes 21251476
chr17 47098371 47098381 MAX JASPAR yes 54609605
chr17 47098385 47098397 NHLH1 JASPAR yes 21251477
chr17 47098385 47098397 NHLH1 JASPAR yes 54609606
chr17 47098386 47098396 NHLH1 JASPAR yes 21251478
chr17 47098386 47098396 NHLH1 JASPAR yes 54609607
chr17 47098388 47098407 REST JASPAR yes 21251479
chr17 47098388 47098407 REST JASPAR yes 54609608
chr17 47098397 47098412 NR2C2 JASPAR yes 21251480
chr17 47098397 47098412 NR2C2 JASPAR yes 54609609
chr17 47098399 47098413 PLAG1 JASPAR yes 21251481
chr17 47098399 47098413 PLAG1 JASPAR yes 54609610
chr17 47098406 47098414 TBX15 JASPAR yes 21251482
chr17 47098406 47098414 TBX15 JASPAR yes 54609611
chr17 47098406 47098417 E2F6 JASPAR yes 21251483
chr17 47098406 47098417 E2F6 JASPAR yes 54609612
chr17 47098407 47098412 SP1 TRANSFAC yes 21251484
chr17 47098407 47098412 SP1 TRANSFAC yes 54609613
chr17 47098412 47098430 ESR2 JASPAR yes 21251485
chr17 47098412 47098430 ESR2 JASPAR yes 54609614
chr17 47098429 47098434 ETS2 TRANSFAC yes 21251486
chr17 47098429 47098434 ETS2 TRANSFAC yes 54609615
chr17 47098481 47098492 NFE2L2 JASPAR yes 21251487
chr17 47098481 47098492 NFE2L2 JASPAR yes 54609616
chr17 47098497 47098501 NFE TRANSFAC yes 21251488
chr17 47098497 47098501 NFE TRANSFAC yes 54609617
chr17 47098503 47098518 FOXP1 JASPAR yes 21251489
chr17 47098503 47098518 FOXP1 JASPAR yes 54609618
chr17 47098503 47098524 IRF1 JASPAR yes 21251490
chr17 47098503 47098524 IRF1 JASPAR yes 54609619
chr17 47098504 47098519 FOXP1 JASPAR yes 21251491
chr17 47098504 47098519 FOXP1 JASPAR yes 54609620
chr17 47098504 47098525 IRF1 JASPAR yes 21251492
chr17 47098504 47098525 IRF1 JASPAR yes 54609621
chr17 47098505 47098510 ETS2 TRANSFAC yes 21251493
chr17 47098505 47098510 ETS2 TRANSFAC yes 54609622
chr17 47098506 47098527 IRF1 JASPAR yes 21251494
chr17 47098506 47098527 IRF1 JASPAR yes 54609623
chr17 47098507 47098522 FOXP1 JASPAR yes 21251495
chr17 47098507 47098522 FOXP1 JASPAR yes 54609624
chr17 47098532 47098542 EN2 JASPAR yes 21251496
chr17 47098532 47098542 LBX2 JASPAR yes 21251497
chr17 47098532 47098542 EN2 JASPAR yes 54609625
chr17 47098532 47098542 LBX2 JASPAR yes 54609626
chr17 47098533 47098541 LHX9 JASPAR yes 21251498
chr17 47098533 47098541 SHOX JASPAR yes 21251499
chr17 47098533 47098541 LHX9 JASPAR yes 54609627
chr17 47098533 47098541 SHOX JASPAR yes 54609628
chr17 47098541 47098562 IRF1 JASPAR yes 21251500
chr17 47098541 47098562 IRF1 JASPAR yes 54609629
chr17 47098542 47098557 FOXP1 JASPAR yes 21251501
chr17 47098542 47098557 FOXP1 JASPAR yes 54609630
chr17 47098543 47098554 FOXP2 JASPAR yes 21251502
chr17 47098543 47098554 FOXP2 JASPAR yes 54609631
chr17 47098543 47098558 STAT2 JASPAR yes 21251503
chr17 47098543 47098558 STAT2 JASPAR yes 54609632
chr17 47098544 47098558 STAT1 JASPAR yes 21251504
chr17 47098544 47098558 STAT1 JASPAR yes 54609633
chr17 47098545 47098556 FOXA1 JASPAR yes 21251505
chr17 47098545 47098556 FOXA1 JASPAR yes 54609634
chr17 47098547 47098562 FOXP1 JASPAR yes 21251506
chr17 47098547 47098562 FOXP1 JASPAR yes 54609635
chr17 47098551 47098565 IRF7 JASPAR yes 21251507
chr17 47098551 47098565 IRF7 JASPAR yes 54609636
chr17 47098574 47098591 RARA JASPAR yes 21251508
chr17 47098574 47098591 RXRA JASPAR yes 21251509
chr17 47098574 47098591 RARA JASPAR yes 54609637
chr17 47098574 47098591 RXRA JASPAR yes 54609638
chr17 47098642 47098653 E2F6 JASPAR yes 21251510
chr17 47098642 47098653 E2F6 JASPAR yes 54609639
chr17 47098649 47098660 EBF1 JASPAR yes 21251511
chr17 47098649 47098660 EBF1 JASPAR yes 54609640
chr17 47098654 47098659 SP1 TRANSFAC yes 21251512
chr17 47098654 47098659 SP1 TRANSFAC yes 54609641
chr17 47098670 47098683 ELF1 JASPAR yes 21251513
chr17 47098670 47098683 ELF1 JASPAR yes 54609642
chr17 47098681 47098687 MYC TRANSFAC yes 21251514
chr17 47098681 47098687 MYC TRANSFAC yes 54609643
chr17 47098687 47098694 SPI1 JASPAR yes 21251515
chr17 47098687 47098694 SPI1 JASPAR yes 54609644
SNP sites on vista25055[chr17:47098330-47098693]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 47098332 rs556847699 TA T
FOXP1 IRF1 TBP
4913096
chr17 47098332 rs751516359 TA T
FOXP1 IRF1 TBP
4913097
chr17 47098332 rs869183521 TA T
FOXP1 IRF1 TBP
4913098
chr17 47098364 rs560259272 G A
TP63 TP73
4913099
chr17 47098392 rs78228532 C A
NHLH1 REST
4913100
chr17 47098418 rs140057634 C T
ESR2
4913101
chr17 47098510 rs531342600 A C,G
ETS2 FOXP1 IRF1
4913102
chr17 47098521 rs116832545 A G
FOXP1 IRF1
4913103
chr17 47098561 rs571160391 T G
FOXP1 IRF1 IRF7
4913104
chr17 47098598 rs190342905 G T no 4913105
chr17 47098677 rs75088489 C G
ELF1
4913106
Genes possibly regulated by vista25055[chr17:47098330-47098693]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 47006678 47022479 - SNF8 ENSG00000159210.5 47022479 0.8 1.0 16005 24149
chr17 47035916 47045958 - GIP ENSG00000159224.4 47045958 0.97 0.97 16006 47628
chr17 47074774 47133012 + IGF2BP1 ENSG00000159217.5 47074774 0.96 0.88 16007 76444
Expression level of Genes
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miRNAs possibly regulated by vista25055[chr17:47098330-47098693]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results