EnhancerDB
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  3. rs116832545[chr17:47098521]
Enhancers that have rs116832545[chr17:47098521]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47091445 47106595 enh17200
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr17 47098330 47098693 vista25055
VISTA
Transcript factors that have rs116832545[chr17:47098521]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47097989 47098546 ZNF274 GTRD no Blood (GM12878) 108268744
chr17 47098087 47098550 ZNF274 GTRD no Blood (GM12878) 108268745
chr17 47098146 47098646 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108268746
chr17 47098503 47098524 IRF1 JASPAR yes 21251490
chr17 47098503 47098524 IRF1 JASPAR yes 54609619
chr17 47098504 47098525 IRF1 JASPAR yes 21251492
chr17 47098504 47098525 IRF1 JASPAR yes 54609621
chr17 47098506 47098527 IRF1 JASPAR yes 21251494
chr17 47098506 47098527 IRF1 JASPAR yes 54609623
chr17 47098507 47098522 FOXP1 JASPAR yes 21251495
chr17 47098507 47098522 FOXP1 JASPAR yes 54609624
Genes associated with rs116832545[chr17:47098521], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More