EnhancerDB
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  3. rs78228532[chr17:47098392]
Enhancers that have rs78228532[chr17:47098392]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47091445 47106595 enh17200
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr17 47098330 47098693 vista25055
VISTA
Transcript factors that have rs78228532[chr17:47098392]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47097837 47098466 ZNF274 GTRD no Blood (GM12878) 108268743
chr17 47097989 47098546 ZNF274 GTRD no Blood (GM12878) 108268744
chr17 47098087 47098550 ZNF274 GTRD no Blood (GM12878) 108268745
chr17 47098146 47098646 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108268746
chr17 47098385 47098397 NHLH1 JASPAR yes 21251477
chr17 47098385 47098397 NHLH1 JASPAR yes 54609606
chr17 47098386 47098396 NHLH1 JASPAR yes 21251478
chr17 47098386 47098396 NHLH1 JASPAR yes 54609607
chr17 47098388 47098407 REST JASPAR yes 21251479
chr17 47098388 47098407 REST JASPAR yes 54609608
Genes associated with rs78228532[chr17:47098392], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More