EnhancerDB
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  3. vista25100[chr17:48255388-48256117]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25100[chr17:48255388-48256117]
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Tissue distribution of vista25100
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Transcription factor that possibly regulate vista25100[chr17:48255388-48256117]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 48255187 48256129 POLR2A UCSC Txn Factor no Conserved 108270537
chr17 48255666 48256060 MAX UCSC Txn Factor no Conserved 108270553
chr17 48255676 48256123 MYC UCSC Txn Factor no Conserved 108270558
chr17 48255700 48255974 USF1 UCSC Txn Factor no Conserved 108270564
chr17 48255718 48256121 CTCF UCSC Txn Factor no Conserved 108270568
chr17 48255755 48256049 RAD21 UCSC Txn Factor no Conserved 108270577
chr17 48255784 48256089 EP300 UCSC Txn Factor no Conserved 108270587
chr17 48255428 48255439 TFAP2B JASPAR yes 21253731
chr17 48255428 48255439 TFAP2B JASPAR yes 54684201
chr17 48255428 48255440 TFAP2B JASPAR yes 21253732
chr17 48255428 48255440 TFAP2B JASPAR yes 54684202
chr17 48255438 48255448 NFIA JASPAR yes 21253733
chr17 48255438 48255448 NFIA JASPAR yes 54684203
chr17 48255440 48255446 NFIC JASPAR yes 21253734
chr17 48255440 48255446 NFIC JASPAR yes 54684204
chr17 48255449 48255470 ZNF263 JASPAR yes 21253735
chr17 48255449 48255470 ZNF263 JASPAR yes 54684205
chr17 48255502 48255509 SPIB JASPAR yes 21253736
chr17 48255502 48255509 SPIB JASPAR yes 54684206
chr17 48255502 48255512 ETV6 JASPAR yes 21253737
chr17 48255502 48255512 ETV6 JASPAR yes 54684207
chr17 48255502 48255513 ELK4 JASPAR yes 21253738
chr17 48255502 48255513 FLI1 JASPAR yes 21253739
chr17 48255502 48255513 ELK4 JASPAR yes 54684208
chr17 48255502 48255513 FLI1 JASPAR yes 54684209
chr17 48255533 48255539 YY1 JASPAR yes 21253740
chr17 48255533 48255539 YY1 JASPAR yes 54684210
chr17 48255539 48255558 CTCF JASPAR yes 21253741
chr17 48255539 48255558 CTCF JASPAR yes 54684211
chr17 48255562 48255577 RFX5 JASPAR yes 21253742
chr17 48255562 48255577 RFX5 JASPAR yes 54684212
chr17 48255568 48255572 LFA1 TRANSFAC yes 21253743
chr17 48255568 48255572 LFA1 TRANSFAC yes 54684213
chr17 48255586 48255595 TFAP2A JASPAR yes 21253744
chr17 48255586 48255595 TFAP2A JASPAR yes 54684214
chr17 48255599 48255612 TFAP2A JASPAR yes 21253745
chr17 48255599 48255612 TFAP2B JASPAR yes 21253746
chr17 48255599 48255612 TFAP2C JASPAR yes 21253747
chr17 48255599 48255612 TFAP2A JASPAR yes 54684215
chr17 48255599 48255612 TFAP2B JASPAR yes 54684216
chr17 48255599 48255612 TFAP2C JASPAR yes 54684217
chr17 48255603 48255609 MAZ TRANSFAC yes 21253748
chr17 48255603 48255609 MAZ TRANSFAC yes 54684218
chr17 48255607 48255611 LFA1 TRANSFAC yes 21253749
chr17 48255607 48255611 LFA1 TRANSFAC yes 54684219
chr17 48255617 48255624 NKX3-1 JASPAR yes 21253750
chr17 48255617 48255624 NKX3-1 JASPAR yes 54684220
chr17 48255618 48255626 FOXC1 JASPAR yes 21253751
chr17 48255618 48255626 FOXC1 JASPAR yes 54684221
chr17 48255626 48255640 ZIC1 JASPAR yes 21253752
chr17 48255626 48255640 ZIC1 JASPAR yes 54684222
chr17 48255626 48255641 ZIC3 JASPAR yes 21253753
chr17 48255626 48255641 ZIC4 JASPAR yes 21253754
chr17 48255626 48255641 ZIC3 JASPAR yes 54684223
chr17 48255626 48255641 ZIC4 JASPAR yes 54684224
chr17 48255629 48255635 MZF1 JASPAR yes 21253755
chr17 48255629 48255635 MZF1 JASPAR yes 54684225
chr17 48255629 48255642 TFAP2A JASPAR yes 21253756
chr17 48255629 48255642 TFAP2C JASPAR yes 21253757
chr17 48255629 48255642 TFAP2A JASPAR yes 54684226
chr17 48255629 48255642 TFAP2C JASPAR yes 54684227
chr17 48255637 48255641 LFA1 TRANSFAC yes 21253758
chr17 48255637 48255641 LFA1 TRANSFAC yes 54684228
chr17 48255646 48255652 SP1 TRANSFAC yes 21253759
chr17 48255646 48255652 SP1 TRANSFAC yes 54684229
chr17 48255687 48255697 ZNF740 JASPAR yes 21253760
chr17 48255687 48255697 ZNF740 JASPAR yes 54684230
chr17 48255687 48255701 GLIS2 JASPAR yes 21253761
chr17 48255687 48255701 GLIS3 JASPAR yes 21253762
chr17 48255687 48255701 GLIS2 JASPAR yes 54684231
chr17 48255687 48255701 GLIS3 JASPAR yes 54684232
chr17 48255687 48255702 ZIC3 JASPAR yes 21253763
chr17 48255687 48255702 ZIC4 JASPAR yes 21253764
chr17 48255687 48255702 ZIC3 JASPAR yes 54684233
chr17 48255687 48255702 ZIC4 JASPAR yes 54684234
chr17 48255705 48255711 SOX10 JASPAR yes 21253765
chr17 48255705 48255711 SOX10 JASPAR yes 54684235
chr17 48255709 48255729 PPARG JASPAR yes 21253766
chr17 48255709 48255729 PPARG JASPAR yes 54684236
chr17 48255713 48255717 LFA1 TRANSFAC yes 21253767
chr17 48255713 48255717 LFA1 TRANSFAC yes 54684237
chr17 48255719 48255724 SP1 TRANSFAC yes 21253768
chr17 48255719 48255724 SP1 TRANSFAC yes 54684238
chr17 48255719 48255725 SP1 TRANSFAC yes 21253769
chr17 48255719 48255725 SP1 TRANSFAC yes 54684239
chr17 48255719 48255726 SP1 TRANSFAC yes 21253770
chr17 48255719 48255726 SP1 TRANSFAC yes 54684240
chr17 48255721 48255742 ZNF263 JASPAR yes 21253771
chr17 48255721 48255742 ZNF263 JASPAR yes 54684241
chr17 48255752 48255764 NHLH1 JASPAR yes 21253772
chr17 48255752 48255764 NHLH1 JASPAR yes 54684242
chr17 48255753 48255763 NHLH1 JASPAR yes 21253773
chr17 48255753 48255763 NHLH1 JASPAR yes 54684243
chr17 48255768 48255789 ZNF263 JASPAR yes 21253774
chr17 48255768 48255789 ZNF263 JASPAR yes 54684244
chr17 48255778 48255782 NFE TRANSFAC yes 21253775
chr17 48255778 48255782 NFE TRANSFAC yes 54684245
chr17 48255797 48255803 YY1 JASPAR yes 21253776
chr17 48255797 48255803 YY1 JASPAR yes 54684246
chr17 48255812 48255824 HNF1B JASPAR yes 21253777
chr17 48255812 48255824 HNF1B JASPAR yes 54684247
chr17 48255815 48255830 ZIC3 JASPAR yes 21253778
chr17 48255815 48255830 ZIC4 JASPAR yes 21253779
chr17 48255815 48255830 ZIC3 JASPAR yes 54684248
chr17 48255815 48255830 ZIC4 JASPAR yes 54684249
chr17 48255816 48255830 ZIC1 JASPAR yes 21253780
chr17 48255816 48255830 ZIC1 JASPAR yes 54684250
chr17 48255834 48255842 EHF JASPAR yes 21253781
chr17 48255834 48255842 EHF JASPAR yes 54684251
chr17 48255836 48255841 ETS2 TRANSFAC yes 21253782
chr17 48255836 48255841 ETS2 TRANSFAC yes 54684252
chr17 48255841 48255849 FOXO3 JASPAR yes 21253783
chr17 48255841 48255849 FOXO3 JASPAR yes 54684253
chr17 48255844 48255850 HiNF-A TRANSFAC yes 21253784
chr17 48255844 48255850 HiNF-A TRANSFAC yes 54684254
chr17 48255855 48255867 HES5 JASPAR yes 21253785
chr17 48255855 48255867 HES5 JASPAR yes 54684255
chr17 48255856 48255866 CLOCK JASPAR yes 21253786
chr17 48255856 48255866 HEY1 JASPAR yes 21253787
chr17 48255856 48255866 HEY2 JASPAR yes 21253788
chr17 48255856 48255866 MAX JASPAR yes 21253789
chr17 48255856 48255866 CLOCK JASPAR yes 54684256
chr17 48255856 48255866 HEY1 JASPAR yes 54684257
chr17 48255856 48255866 HEY2 JASPAR yes 54684258
chr17 48255856 48255866 MAX JASPAR yes 54684259
chr17 48255856 48255867 USF1 JASPAR yes 21253790
chr17 48255856 48255867 USF1 JASPAR yes 54684260
chr17 48255857 48255867 MAX JASPAR yes 21253791
chr17 48255857 48255867 MAX JASPAR yes 54684261
chr17 48255858 48255863 MYC TRANSFAC yes 21253792
chr17 48255858 48255863 USF1 TRANSFAC yes 21253793
chr17 48255858 48255863 USF2 TRANSFAC yes 21253794
chr17 48255858 48255863 MYC TRANSFAC yes 54684262
chr17 48255858 48255863 USF1 TRANSFAC yes 54684263
chr17 48255858 48255863 USF2 TRANSFAC yes 54684264
chr17 48255858 48255865 USF1 JASPAR yes 21253795
chr17 48255858 48255865 USF1 JASPAR yes 54684265
chr17 48255861 48255871 SREBF1 JASPAR yes 21253796
chr17 48255861 48255871 SREBF2 JASPAR yes 21253797
chr17 48255861 48255871 SREBF1 JASPAR yes 54684266
chr17 48255861 48255871 SREBF2 JASPAR yes 54684267
chr17 48255896 48255900 NFE TRANSFAC yes 21253798
chr17 48255896 48255900 NFE TRANSFAC yes 54684268
chr17 48255910 48255921 JUNB JASPAR yes 21253799
chr17 48255910 48255921 JUNB JASPAR yes 54684269
chr17 48255911 48255922 FOSL1 JASPAR yes 21253800
chr17 48255911 48255922 FOSL1 JASPAR yes 54684270
chr17 48255912 48255919 JUN TRANSFAC yes 21253801
chr17 48255912 48255919 JUN TRANSFAC yes 54684271
chr17 48255936 48255951 NR2C2 JASPAR yes 21253802
chr17 48255936 48255951 NR2C2 JASPAR yes 54684272
chr17 48255940 48255959 CTCF JASPAR yes 21253803
chr17 48255940 48255959 CTCF JASPAR yes 54684273
chr17 48255943 48255958 ZIC3 JASPAR yes 21253804
chr17 48255943 48255958 ZIC3 JASPAR yes 54684274
chr17 48255959 48255965 NFE2 TRANSFAC yes 21253805
chr17 48255959 48255965 NFE2 TRANSFAC yes 54684275
chr17 48255960 48255972 TFAP2A JASPAR yes 21253806
chr17 48255960 48255972 TFAP2B JASPAR yes 21253807
chr17 48255960 48255972 TFAP2C JASPAR yes 21253808
chr17 48255960 48255972 TFAP2A JASPAR yes 54684276
chr17 48255960 48255972 TFAP2B JASPAR yes 54684277
chr17 48255960 48255972 TFAP2C JASPAR yes 54684278
chr17 48255960 48255975 TFAP2A JASPAR yes 21253809
chr17 48255960 48255975 TFAP2C JASPAR yes 21253810
chr17 48255960 48255975 TFAP2A JASPAR yes 54684279
chr17 48255960 48255975 TFAP2C JASPAR yes 54684280
chr17 48255994 48256007 SCRT2 JASPAR yes 21253811
chr17 48255994 48256007 SCRT2 JASPAR yes 54684281
chr17 48255996 48256008 TAL1 JASPAR yes 21253812
chr17 48255996 48256008 TAL1 JASPAR yes 54684282
chr17 48255997 48256010 ZBTB18 JASPAR yes 21253813
chr17 48255997 48256010 ZBTB18 JASPAR yes 54684283
chr17 48255998 48256008 MSC JASPAR yes 21253814
chr17 48255998 48256008 MYF6 JASPAR yes 21253815
chr17 48255998 48256008 TFAP4 JASPAR yes 21253816
chr17 48255998 48256008 MSC JASPAR yes 54684284
chr17 48255998 48256008 MYF6 JASPAR yes 54684285
chr17 48255998 48256008 TFAP4 JASPAR yes 54684286
chr17 48255998 48256010 TAL1 JASPAR yes 21253817
chr17 48255998 48256010 TAL1 JASPAR yes 54684287
chr17 48256049 48256052 MYB TRANSFAC yes 21253818
chr17 48256049 48256052 MYB TRANSFAC yes 54684288
chr17 48256050 48256065 TFAP2A JASPAR yes 21253819
chr17 48256050 48256065 TFAP2A JASPAR yes 54684289
chr17 48256053 48256065 TFAP2A JASPAR yes 21253820
chr17 48256053 48256065 TFAP2B JASPAR yes 21253821
chr17 48256053 48256065 TFAP2C JASPAR yes 21253822
chr17 48256053 48256065 TFAP2A JASPAR yes 54684290
chr17 48256053 48256065 TFAP2B JASPAR yes 54684291
chr17 48256053 48256065 TFAP2C JASPAR yes 54684292
chr17 48256053 48256068 TFAP2A JASPAR yes 21253823
chr17 48256053 48256068 TFAP2A JASPAR yes 54684293
chr17 48256073 48256081 HOXA5 JASPAR yes 21253824
chr17 48256073 48256081 HOXA5 JASPAR yes 54684294
chr17 48256117 48256121 YY1 TRANSFAC yes 21253825
chr17 48256117 48256121 YY1 TRANSFAC yes 54684295
SNP sites on vista25100[chr17:48255388-48256117]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 48255449 rs146128632 G A
POLR2A ZNF263
4921277
chr17 48255539 rs143731700 C T
CTCF POLR2A YY1
4921278
chr17 48255567 rs557870520 C G
POLR2A RFX5
4921279
chr17 48255627 rs79605988 G T
POLR2A ZIC1 ZIC3 ZIC4
4921280
chr17 48255659 rs113282401 G A
POLR2A
4921281
chr17 48255722 rs556182634 G A
CTCF MAX MYC POLR2A PPARG SP1 USF1 ZNF263
4921282
chr17 48255728 rs2696284 A G
CTCF MAX MYC POLR2A PPARG USF1 ZNF263
4921283
chr17 48255779 rs548390990 CT C
CTCF MAX MYC NFE POLR2A RAD21 USF1 ZNF263
4921284
chr17 48255787 rs377715007 TCCAGTC T
CTCF EP300 MAX MYC POLR2A RAD21 USF1 ZNF263
4921285
chr17 48255792 rs185769434 T A
CTCF EP300 MAX MYC POLR2A RAD21 USF1
4921286
chr17 48255915 rs148519954 G A
CTCF EP300 FOSL1 JUN JUNB MAX MYC POLR2A RAD21 USF1
4921287
chr17 48255972 rs115613934 A G
CTCF EP300 MAX MYC POLR2A RAD21 TFAP2A TFAP2B TFAP2C USF1
4921288
chr17 48256042 rs142786614 G C
CTCF EP300 MAX MYC POLR2A RAD21
4921289
chr17 48256089 rs151024393 G T
CTCF EP300 MYC POLR2A
4921290
Genes possibly regulated by vista25100[chr17:48255388-48256117]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 48172101 48189516 + PDK2 ENSG00000005882.7 48172101 0.81 1.0 16025 16713
chr17 48187404 48207246 - SAMD14 ENSG00000167100.10 48207246 0.88 1.0 16026 51858
chr17 48211104 48227991 - PPP1R9B ENSG00000108819.9 48227991 0.74 1.0 16027 72603
chr17 48241575 48253292 + SGCA ENSG00000108823.11 48241575 0.88 1.0 16028 86187
chr17 48260650 48278993 - COL1A1 ENSG00000108821.9 48278993 0.95 0.99 16029 77124
chr17 48348767 48358844 + TMEM92 ENSG00000167105.3 48348767 0.95 1.0 16030 7350
Expression level of Genes
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miRNAs possibly regulated by vista25100[chr17:48255388-48256117]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results