EnhancerDB
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  3. rs557870520[chr17:48255567]
Enhancers that have rs557870520[chr17:48255567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48252339 48263735 enh17215
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Lung Stomach Placenta Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
chr17 48255388 48256117 vista25100
VISTA
Transcript factors that have rs557870520[chr17:48255567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48255120 48255640 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108270535
chr17 48255187 48255823 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108270536
chr17 48255187 48256129 POLR2A UCSC Txn Factor no Conserved 108270537
chr17 48255367 48255811 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108270538
chr17 48255399 48255709 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108270539
chr17 48255537 48256137 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108270540
chr17 48255540 48255790 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108270541
chr17 48255540 48255916 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108270542
chr17 48255562 48255577 RFX5 JASPAR yes 21253742
chr17 48255562 48255577 RFX5 JASPAR yes 54684212
Genes associated with rs557870520[chr17:48255567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More