EnhancerDB
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  3. rs79605988[chr17:48255627]
Enhancers that have rs79605988[chr17:48255627]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48252339 48263735 enh17215
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Lung Stomach Placenta Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
chr17 48255388 48256117 vista25100
VISTA
Transcript factors that have rs79605988[chr17:48255627]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48255120 48255640 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108270535
chr17 48255187 48255823 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108270536
chr17 48255187 48256129 POLR2A UCSC Txn Factor no Conserved 108270537
chr17 48255367 48255811 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108270538
chr17 48255399 48255709 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108270539
chr17 48255537 48256137 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108270540
chr17 48255540 48255790 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108270541
chr17 48255540 48255916 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108270542
chr17 48255573 48256097 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108270543
chr17 48255577 48255893 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108270544
chr17 48255605 48255849 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108270545
chr17 48255613 48256117 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21769475
chr17 48255613 48256117 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108270546
chr17 48255621 48256085 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108270547
chr17 48255623 48256219 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21769476
chr17 48255623 48256219 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108270548
chr17 48255626 48255640 ZIC1 JASPAR yes 21253752
chr17 48255626 48255640 ZIC1 JASPAR yes 54684222
chr17 48255626 48255641 ZIC3 JASPAR yes 21253753
chr17 48255626 48255641 ZIC4 JASPAR yes 21253754
chr17 48255626 48255641 ZIC3 JASPAR yes 54684223
chr17 48255626 48255641 ZIC4 JASPAR yes 54684224
Genes associated with rs79605988[chr17:48255627], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More