EnhancerDB
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  3. vista25230[chr17:55501996-55502706]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25230[chr17:55501996-55502706]
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Tissue distribution of vista25230
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Transcription factor that possibly regulate vista25230[chr17:55501996-55502706]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55502023 55502035 YY1 JASPAR yes 21259489
chr17 55502023 55502035 YY1 JASPAR yes 54954073
chr17 55502051 55502061 ID4 JASPAR yes 21259490
chr17 55502051 55502061 TCF3 JASPAR yes 21259491
chr17 55502051 55502061 TCF4 JASPAR yes 21259492
chr17 55502051 55502061 ID4 JASPAR yes 54954074
chr17 55502051 55502061 TCF3 JASPAR yes 54954075
chr17 55502051 55502061 TCF4 JASPAR yes 54954076
chr17 55502052 55502061 SNAI2 JASPAR yes 21259493
chr17 55502052 55502061 SNAI2 JASPAR yes 54954077
chr17 55502053 55502058 USF2 TRANSFAC yes 21259494
chr17 55502053 55502058 USF2 TRANSFAC yes 54954078
chr17 55502058 55502068 FIGLA JASPAR yes 21259495
chr17 55502058 55502068 FIGLA JASPAR yes 54954079
chr17 55502063 55502069 ZNF354C JASPAR yes 21259496
chr17 55502063 55502069 ZNF354C JASPAR yes 54954080
chr17 55502076 55502090 EBF1 JASPAR yes 21259497
chr17 55502076 55502090 EBF1 JASPAR yes 54954081
chr17 55502077 55502088 EBF1 JASPAR yes 21259498
chr17 55502077 55502088 EBF1 JASPAR yes 54954082
chr17 55502078 55502089 EBF1 JASPAR yes 21259499
chr17 55502078 55502089 EBF1 JASPAR yes 54954083
chr17 55502085 55502100 RFX5 JASPAR yes 21259500
chr17 55502085 55502100 RFX5 JASPAR yes 54954084
chr17 55502100 55502104 NFE TRANSFAC yes 21259501
chr17 55502100 55502104 NFE TRANSFAC yes 54954085
chr17 55502116 55502131 RUNX2 JASPAR yes 21259502
chr17 55502116 55502131 RUNX2 JASPAR yes 54954086
chr17 55502123 55502138 HNF4A JASPAR yes 21259503
chr17 55502123 55502138 HNF4A JASPAR yes 54954087
chr17 55502124 55502139 HNF4G JASPAR yes 21259504
chr17 55502124 55502139 HNF4G JASPAR yes 54954088
chr17 55502145 55502160 NR2C2 JASPAR yes 21259505
chr17 55502145 55502160 NR2C2 JASPAR yes 54954089
chr17 55502148 55502152 LFA1 TRANSFAC yes 21259506
chr17 55502148 55502152 LFA1 TRANSFAC yes 54954090
chr17 55502148 55502160 INSM1 JASPAR yes 21259507
chr17 55502148 55502160 INSM1 JASPAR yes 54954091
chr17 55502188 55502194 TCF4 TRANSFAC yes 21259508
chr17 55502188 55502194 TCF4 TRANSFAC yes 54954092
chr17 55502198 55502212 CREB3L1 JASPAR yes 21259509
chr17 55502198 55502212 CREB3L1 JASPAR yes 54954093
chr17 55502218 55502229 E2F6 JASPAR yes 21259510
chr17 55502218 55502229 E2F6 JASPAR yes 54954094
chr17 55502244 55502255 EBF1 JASPAR yes 21259511
chr17 55502244 55502255 EBF1 JASPAR yes 54954095
chr17 55502282 55502292 SREBF2 JASPAR yes 21259512
chr17 55502282 55502292 SREBF2 JASPAR yes 54954096
chr17 55502283 55502292 SNAI2 JASPAR yes 21259513
chr17 55502283 55502292 SNAI2 JASPAR yes 54954097
chr17 55502284 55502289 USF2 TRANSFAC yes 21259514
chr17 55502284 55502289 USF2 TRANSFAC yes 54954098
chr17 55502302 55502312 HOXA13 JASPAR yes 21259515
chr17 55502302 55502312 HOXB13 JASPAR yes 21259516
chr17 55502302 55502312 HOXC10 JASPAR yes 21259517
chr17 55502302 55502312 HOXD11 JASPAR yes 21259518
chr17 55502302 55502312 HOXD13 JASPAR yes 21259519
chr17 55502302 55502312 HOXA13 JASPAR yes 54954099
chr17 55502302 55502312 HOXB13 JASPAR yes 54954100
chr17 55502302 55502312 HOXC10 JASPAR yes 54954101
chr17 55502302 55502312 HOXD11 JASPAR yes 54954102
chr17 55502302 55502312 HOXD13 JASPAR yes 54954103
chr17 55502302 55502313 HOXC13 JASPAR yes 21259520
chr17 55502302 55502313 HOXD12 JASPAR yes 21259521
chr17 55502302 55502313 HOXC13 JASPAR yes 54954104
chr17 55502302 55502313 HOXD12 JASPAR yes 54954105
chr17 55502303 55502312 CDX1 JASPAR yes 21259522
chr17 55502303 55502312 CDX1 JASPAR yes 54954106
chr17 55502311 55502315 H4TF2 TRANSFAC yes 21259523
chr17 55502311 55502315 H4TF2 TRANSFAC yes 54954107
chr17 55502339 55502350 FLI1 JASPAR yes 21259524
chr17 55502339 55502350 FLI1 JASPAR yes 54954108
chr17 55502340 55502344 YY1 TRANSFAC yes 21259525
chr17 55502340 55502344 YY1 TRANSFAC yes 54954109
chr17 55502341 55502349 FEV JASPAR yes 21259526
chr17 55502341 55502349 FEV JASPAR yes 54954110
chr17 55502343 55502348 ETS2 TRANSFAC yes 21259527
chr17 55502343 55502348 ETS2 TRANSFAC yes 54954111
chr17 55502345 55502353 EHF JASPAR yes 21259528
chr17 55502345 55502353 EHF JASPAR yes 54954112
chr17 55502347 55502359 INSM1 JASPAR yes 21259529
chr17 55502347 55502359 INSM1 JASPAR yes 54954113
chr17 55502352 55502362 SP1 JASPAR yes 21259530
chr17 55502352 55502362 SP1 JASPAR yes 54954114
chr17 55502353 55502357 LFA1 TRANSFAC yes 21259531
chr17 55502353 55502357 LFA1 TRANSFAC yes 54954115
chr17 55502359 55502370 FOS JASPAR yes 21259532
chr17 55502359 55502370 JUND JASPAR yes 21259533
chr17 55502359 55502370 FOS JASPAR yes 54954116
chr17 55502359 55502370 JUND JASPAR yes 54954117
chr17 55502360 55502371 FOSL2 JASPAR yes 21259534
chr17 55502360 55502371 JUNB JASPAR yes 21259535
chr17 55502360 55502371 FOSL2 JASPAR yes 54954118
chr17 55502360 55502371 JUNB JASPAR yes 54954119
chr17 55502372 55502387 ZIC3 JASPAR yes 21259536
chr17 55502372 55502387 ZIC4 JASPAR yes 21259537
chr17 55502372 55502387 ZIC3 JASPAR yes 54954120
chr17 55502372 55502387 ZIC4 JASPAR yes 54954121
chr17 55502373 55502387 ZIC1 JASPAR yes 21259538
chr17 55502373 55502387 ZIC1 JASPAR yes 54954122
chr17 55502380 55502390 SP1 JASPAR yes 21259539
chr17 55502380 55502390 SP1 JASPAR yes 54954123
chr17 55502383 55502388 SP1 TRANSFAC yes 21259540
chr17 55502383 55502388 SP1 TRANSFAC yes 54954124
chr17 55502387 55502391 LFA1 TRANSFAC yes 21259541
chr17 55502387 55502391 LFA1 TRANSFAC yes 54954125
chr17 55502393 55502406 ELF1 JASPAR yes 21259542
chr17 55502393 55502406 ELF1 JASPAR yes 54954126
chr17 55502428 55502439 CDX2 JASPAR yes 21259543
chr17 55502428 55502439 CDX2 JASPAR yes 54954127
chr17 55502429 55502436 GATA1 TRANSFAC yes 21259544
chr17 55502429 55502436 GATA1 TRANSFAC yes 54954128
chr17 55502430 55502439 CDX1 JASPAR yes 21259545
chr17 55502430 55502439 CDX1 JASPAR yes 54954129
chr17 55502432 55502436 TEAD2 TRANSFAC yes 21259546
chr17 55502432 55502436 TEAD2 TRANSFAC yes 54954130
chr17 55502432 55502437 TBP TRANSFAC yes 21259547
chr17 55502432 55502437 TBP TRANSFAC yes 54954131
chr17 55502432 55502438 TFIID TRANSFAC yes 21259548
chr17 55502432 55502438 TFIID TRANSFAC yes 54954132
chr17 55502465 55502486 IRF1 JASPAR yes 21259549
chr17 55502465 55502486 IRF1 JASPAR yes 54954133
chr17 55502476 55502480 YY1 TRANSFAC yes 21259550
chr17 55502476 55502480 YY1 TRANSFAC yes 54954134
chr17 55502479 55502487 OTX1 JASPAR yes 21259551
chr17 55502479 55502487 OTX2 JASPAR yes 21259552
chr17 55502479 55502487 OTX1 JASPAR yes 54954135
chr17 55502479 55502487 OTX2 JASPAR yes 54954136
chr17 55502493 55502498 GATA2 JASPAR yes 21259553
chr17 55502493 55502498 GATA2 JASPAR yes 54954137
chr17 55502505 55502511 MAZ TRANSFAC yes 21259554
chr17 55502505 55502511 MAZ TRANSFAC yes 54954138
chr17 55502541 55502556 HSF1 JASPAR yes 21259555
chr17 55502541 55502556 HSF1 JASPAR yes 54954139
chr17 55502542 55502555 HSF1 JASPAR yes 21259556
chr17 55502542 55502555 HSF2 JASPAR yes 21259557
chr17 55502542 55502555 HSF4 JASPAR yes 21259558
chr17 55502542 55502555 HSF1 JASPAR yes 54954140
chr17 55502542 55502555 HSF2 JASPAR yes 54954141
chr17 55502542 55502555 HSF4 JASPAR yes 54954142
chr17 55502546 55502561 HSF1 JASPAR yes 21259559
chr17 55502546 55502561 HSF1 JASPAR yes 54954143
chr17 55502547 55502560 HSF1 JASPAR yes 21259560
chr17 55502547 55502560 HSF2 JASPAR yes 21259561
chr17 55502547 55502560 HSF4 JASPAR yes 21259562
chr17 55502547 55502560 HSF1 JASPAR yes 54954144
chr17 55502547 55502560 HSF2 JASPAR yes 54954145
chr17 55502547 55502560 HSF4 JASPAR yes 54954146
chr17 55502563 55502568 MYC TRANSFAC yes 21259563
chr17 55502563 55502568 MYC TRANSFAC yes 54954147
chr17 55502571 55502583 NHLH1 JASPAR yes 21259564
chr17 55502571 55502583 NHLH1 JASPAR yes 54954148
chr17 55502572 55502582 NHLH1 JASPAR yes 21259565
chr17 55502572 55502582 NHLH1 JASPAR yes 54954149
chr17 55502596 55502606 NFKB1 JASPAR yes 21259566
chr17 55502596 55502606 NFKB1 JASPAR yes 54954150
chr17 55502607 55502611 YY1 TRANSFAC yes 21259567
chr17 55502607 55502611 YY1 TRANSFAC yes 54954151
chr17 55502620 55502630 SREBF1 JASPAR yes 21259568
chr17 55502620 55502630 SREBF1 JASPAR yes 54954152
chr17 55502634 55502648 SPI1 JASPAR yes 21259569
chr17 55502634 55502648 SPI1 JASPAR yes 54954153
chr17 55502639 55502644 ETS2 TRANSFAC yes 21259570
chr17 55502639 55502644 ETS2 TRANSFAC yes 54954154
chr17 55502639 55502647 FEV JASPAR yes 21259571
chr17 55502639 55502647 FEV JASPAR yes 54954155
chr17 55502640 55502647 SPI1 JASPAR yes 21259572
chr17 55502640 55502647 SPI1 JASPAR yes 54954156
chr17 55502644 55502659 HNF1A JASPAR yes 21259573
chr17 55502644 55502659 MEF2A JASPAR yes 21259574
chr17 55502644 55502659 HNF1A JASPAR yes 54954157
chr17 55502644 55502659 MEF2A JASPAR yes 54954158
chr17 55502645 55502660 MEF2C JASPAR yes 21259575
chr17 55502645 55502660 MEF2C JASPAR yes 54954159
chr17 55502646 55502658 MEF2A JASPAR yes 21259576
chr17 55502646 55502658 MEF2B JASPAR yes 21259577
chr17 55502646 55502658 MEF2D JASPAR yes 21259578
chr17 55502646 55502658 MEF2A JASPAR yes 54954160
chr17 55502646 55502658 MEF2B JASPAR yes 54954161
chr17 55502646 55502658 MEF2D JASPAR yes 54954162
chr17 55502647 55502657 MEF2A JASPAR yes 21259579
chr17 55502647 55502657 MEF2A JASPAR yes 54954163
chr17 55502648 55502652 YY1 TRANSFAC yes 21259580
chr17 55502648 55502652 YY1 TRANSFAC yes 54954164
chr17 55502654 55502657 MYB TRANSFAC yes 21259581
chr17 55502654 55502657 MYB TRANSFAC yes 54954165
chr17 55502660 55502664 YY1 TRANSFAC yes 21259582
chr17 55502660 55502664 YY1 TRANSFAC yes 54954166
chr17 55502668 55502674 TCF4 TRANSFAC yes 21259583
chr17 55502668 55502674 TCF4 TRANSFAC yes 54954167
chr17 55502669 55502678 SRY JASPAR yes 21259584
chr17 55502669 55502678 SRY JASPAR yes 54954168
chr17 55502676 55502688 IRF1 JASPAR yes 21259585
chr17 55502676 55502688 IRF1 JASPAR yes 54954169
chr17 55502706 55502714 FOXL1 JASPAR yes 21259586
chr17 55502706 55502714 FOXL1 JASPAR yes 54954170
SNP sites on vista25230[chr17:55501996-55502706]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55502110 rs112706636 T C no 4949672
chr17 55502134 rs78915042 T C
HNF4A HNF4G
4949673
chr17 55502171 rs567308407 G A,C no 4949674
chr17 55502200 rs142528721 G C
CREB3L1
4949675
chr17 55502245 rs117147393 C A
EBF1
4949676
chr17 55502411 rs16958358 G A no 4949677
chr17 55502459 rs74366318 C T no 4949678
chr17 55502473 rs76160400 C T
IRF1
4949679
chr17 55502492 rs74417062 G A no 4949680
chr17 55502646 rs56047086 GTTTATT G
FEV HNF1A MEF2A MEF2B MEF2C MEF2D SPI1
4949681
chr17 55502646 rs67818773 GTTTATT G
FEV HNF1A MEF2A MEF2B MEF2C MEF2D SPI1
4949682
Genes possibly regulated by vista25230[chr17:55501996-55502706]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista25230[chr17:55501996-55502706]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results