EnhancerDB
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  3. rs117147393[chr17:55502245]
Enhancers that have rs117147393[chr17:55502245]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 55501996 55502706 vista25230
VISTA
Transcript factors that have rs117147393[chr17:55502245]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55502048 55502708 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773517
chr17 55502048 55502708 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273989
chr17 55502089 55502605 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773518
chr17 55502089 55502605 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273990
chr17 55502105 55502609 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773519
chr17 55502105 55502609 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273991
chr17 55502139 55502535 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773520
chr17 55502139 55502535 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273992
chr17 55502140 55502543 ZNF143 GTRD no Epithelial (MCF-7) 108273993
chr17 55502152 55502616 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108273994
chr17 55502157 55502447 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773521
chr17 55502157 55502447 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273995
chr17 55502167 55502543 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108273996
chr17 55502210 55502547 ZNF143 GTRD no Epithelial (MCF-7) 108273997
chr17 55502210 55502550 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773522
chr17 55502210 55502550 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273998
chr17 55502225 55502561 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21773523
chr17 55502225 55502561 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108273999
chr17 55502233 55502503 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108274000
chr17 55502244 55502255 EBF1 JASPAR yes 21259511
chr17 55502244 55502255 EBF1 JASPAR yes 54954095
Genes associated with rs117147393[chr17:55502245], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More