EnhancerDB
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  3. rs74417062[chr17:55502492]
Enhancers that have rs74417062[chr17:55502492]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 55501996 55502706 vista25230
VISTA
Transcript factors that have rs74417062[chr17:55502492]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55502048 55502708 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773517
chr17 55502048 55502708 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273989
chr17 55502089 55502605 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773518
chr17 55502089 55502605 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273990
chr17 55502105 55502609 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773519
chr17 55502105 55502609 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273991
chr17 55502139 55502535 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773520
chr17 55502139 55502535 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273992
chr17 55502140 55502543 ZNF143 GTRD no Epithelial (MCF-7) 108273993
chr17 55502152 55502616 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108273994
chr17 55502167 55502543 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108273996
chr17 55502210 55502547 ZNF143 GTRD no Epithelial (MCF-7) 108273997
chr17 55502210 55502550 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773522
chr17 55502210 55502550 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273998
chr17 55502225 55502561 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21773523
chr17 55502225 55502561 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108273999
chr17 55502233 55502503 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108274000
chr17 55502359 55502715 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773524
chr17 55502359 55502715 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108274001
Genes associated with rs74417062[chr17:55502492], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 56080721 56084707 - SRSF1 ENSG00000136450.8 56084707 578229 Adrenal 0.238405 16078