EnhancerDB
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  3. vista25272[chr17:56023350-56023692]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25272[chr17:56023350-56023692]
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Tissue distribution of vista25272
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Transcription factor that possibly regulate vista25272[chr17:56023350-56023692]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 56023347 56023362 MEF2C JASPAR yes 21261643
chr17 56023347 56023362 MEF2C JASPAR yes 55003250
chr17 56023348 56023363 MEF2A JASPAR yes 21261644
chr17 56023348 56023363 MEF2A JASPAR yes 55003251
chr17 56023350 56023364 IRF7 JASPAR yes 21261645
chr17 56023350 56023364 IRF7 JASPAR yes 55003252
chr17 56023351 56023366 FOXP1 JASPAR yes 21261646
chr17 56023351 56023366 FOXP1 JASPAR yes 55003253
chr17 56023354 56023375 IRF1 JASPAR yes 21261647
chr17 56023354 56023375 IRF1 JASPAR yes 55003254
chr17 56023357 56023363 TBP TRANSFAC yes 21261648
chr17 56023357 56023363 TBP TRANSFAC yes 55003255
chr17 56023358 56023373 FOXP1 JASPAR yes 21261649
chr17 56023358 56023373 FOXP1 JASPAR yes 55003256
chr17 56023360 56023375 FOXP1 JASPAR yes 21261650
chr17 56023360 56023375 MEF2C JASPAR yes 21261651
chr17 56023360 56023375 FOXP1 JASPAR yes 55003257
chr17 56023360 56023375 MEF2C JASPAR yes 55003258
chr17 56023360 56023381 IRF1 JASPAR yes 21261652
chr17 56023360 56023381 IRF1 JASPAR yes 55003259
chr17 56023364 56023370 TBP TRANSFAC yes 21261653
chr17 56023364 56023370 TBP TRANSFAC yes 55003260
chr17 56023365 56023380 FOXP1 JASPAR yes 21261654
chr17 56023365 56023380 FOXP1 JASPAR yes 55003261
chr17 56023367 56023387 RREB1 JASPAR yes 21261655
chr17 56023367 56023387 RREB1 JASPAR yes 55003262
chr17 56023373 56023388 RUNX2 JASPAR yes 21261656
chr17 56023373 56023388 RUNX2 JASPAR yes 55003263
chr17 56023386 56023390 YY1 TRANSFAC yes 21261657
chr17 56023386 56023390 YY1 TRANSFAC yes 55003264
chr17 56023393 56023404 PROP1 JASPAR yes 21261658
chr17 56023393 56023404 PROP1 JASPAR yes 55003265
chr17 56023416 56023430 STAT1 JASPAR yes 21261659
chr17 56023416 56023430 STAT1 JASPAR yes 55003266
chr17 56023416 56023431 STAT2 JASPAR yes 21261660
chr17 56023416 56023431 STAT2 JASPAR yes 55003267
chr17 56023418 56023439 IRF1 JASPAR yes 21261661
chr17 56023418 56023439 IRF1 JASPAR yes 55003268
chr17 56023422 56023437 STAT2 JASPAR yes 21261662
chr17 56023422 56023437 STAT2 JASPAR yes 55003269
chr17 56023442 56023452 CEBPG JASPAR yes 21261663
chr17 56023442 56023452 CEBPG JASPAR yes 55003270
chr17 56023444 56023450 JUN TRANSFAC yes 21261664
chr17 56023444 56023450 JUN TRANSFAC yes 55003271
chr17 56023448 56023451 MYB TRANSFAC yes 21261665
chr17 56023448 56023451 MYB TRANSFAC yes 55003272
chr17 56023519 56023529 ALX3 JASPAR yes 21261666
chr17 56023519 56023529 EMX1 JASPAR yes 21261667
chr17 56023519 56023529 HOXB2 JASPAR yes 21261668
chr17 56023519 56023529 HOXB3 JASPAR yes 21261669
chr17 56023519 56023529 MEOX2 JASPAR yes 21261670
chr17 56023519 56023529 MNX1 JASPAR yes 21261671
chr17 56023519 56023529 ALX3 JASPAR yes 55003273
chr17 56023519 56023529 EMX1 JASPAR yes 55003274
chr17 56023519 56023529 HOXB2 JASPAR yes 55003275
chr17 56023519 56023529 HOXB3 JASPAR yes 55003276
chr17 56023519 56023529 MEOX2 JASPAR yes 55003277
chr17 56023519 56023529 MNX1 JASPAR yes 55003278
chr17 56023520 56023528 LMX1A JASPAR yes 21261672
chr17 56023520 56023528 LMX1B JASPAR yes 21261673
chr17 56023520 56023528 NKX6-1 JASPAR yes 21261674
chr17 56023520 56023528 NKX6-2 JASPAR yes 21261675
chr17 56023520 56023528 PDX1 JASPAR yes 21261676
chr17 56023520 56023528 VAX1 JASPAR yes 21261677
chr17 56023520 56023528 VAX2 JASPAR yes 21261678
chr17 56023520 56023528 VSX1 JASPAR yes 21261679
chr17 56023520 56023528 LMX1A JASPAR yes 55003279
chr17 56023520 56023528 LMX1B JASPAR yes 55003280
chr17 56023520 56023528 NKX6-1 JASPAR yes 55003281
chr17 56023520 56023528 NKX6-2 JASPAR yes 55003282
chr17 56023520 56023528 PDX1 JASPAR yes 55003283
chr17 56023520 56023528 VAX1 JASPAR yes 55003284
chr17 56023520 56023528 VAX2 JASPAR yes 55003285
chr17 56023520 56023528 VSX1 JASPAR yes 55003286
chr17 56023520 56023531 FOXB1 JASPAR yes 21261680
chr17 56023520 56023531 FOXB1 JASPAR yes 55003287
chr17 56023525 56023535 TEAD1 JASPAR yes 21261681
chr17 56023525 56023535 TEAD1 JASPAR yes 55003288
chr17 56023542 56023548 TCF1 TRANSFAC yes 21261682
chr17 56023542 56023548 TCF1 TRANSFAC yes 55003289
chr17 56023542 56023549 TCF4 TRANSFAC yes 21261683
chr17 56023542 56023549 TCF4 TRANSFAC yes 55003290
chr17 56023547 56023556 NKX3-2 JASPAR yes 21261684
chr17 56023547 56023556 NKX3-2 JASPAR yes 55003291
chr17 56023547 56023557 NKX2-3 JASPAR yes 21261685
chr17 56023547 56023557 NKX2-3 JASPAR yes 55003292
chr17 56023548 56023556 ISL2 JASPAR yes 21261686
chr17 56023548 56023556 ISL2 JASPAR yes 55003293
chr17 56023550 56023560 HOXC10 JASPAR yes 21261687
chr17 56023550 56023560 HOXD11 JASPAR yes 21261688
chr17 56023550 56023560 HOXC10 JASPAR yes 55003294
chr17 56023550 56023560 HOXD11 JASPAR yes 55003295
chr17 56023550 56023561 HOXC11 JASPAR yes 21261689
chr17 56023550 56023561 HOXC12 JASPAR yes 21261690
chr17 56023550 56023561 HOXC11 JASPAR yes 55003296
chr17 56023550 56023561 HOXC12 JASPAR yes 55003297
chr17 56023553 56023556 MYB TRANSFAC yes 21261691
chr17 56023553 56023556 MYB TRANSFAC yes 55003298
chr17 56023581 56023600 PAX5 JASPAR yes 21261692
chr17 56023581 56023600 PAX5 JASPAR yes 55003299
chr17 56023642 56023657 MEF2C JASPAR yes 21261693
chr17 56023642 56023657 MEF2C JASPAR yes 55003300
chr17 56023643 56023658 MEF2A JASPAR yes 21261694
chr17 56023643 56023658 MEF2A JASPAR yes 55003301
chr17 56023650 56023664 IRF7 JASPAR yes 21261695
chr17 56023650 56023664 IRF7 JASPAR yes 55003302
chr17 56023656 56023670 POU4F1 JASPAR yes 21261696
chr17 56023656 56023670 POU4F1 JASPAR yes 55003303
chr17 56023663 56023667 TEAD2 TRANSFAC yes 21261697
chr17 56023663 56023667 TEAD2 TRANSFAC yes 55003304
chr17 56023665 56023668 MYB TRANSFAC yes 21261698
chr17 56023665 56023668 MYB TRANSFAC yes 55003305
SNP sites on vista25272[chr17:56023350-56023692]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 56023372 rs145486886 A T
FOXP1 IRF1 MEF2C RREB1
4954718
chr17 56023378 rs140292889 C T
FOXP1 IRF1 RREB1 RUNX2
4954719
chr17 56023521 rs117638465 T G
ALX3 EMX1 FOXB1 HOXB2 HOXB3 LMX1A LMX1B MEOX2 MNX1 NKX6-1 NKX6-2 PDX1 VAX1 VAX2 VSX1
4954720
chr17 56023676 rs190779955 A G no 4954721
Genes possibly regulated by vista25272[chr17:56023350-56023692]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 55916842 55927417 - MRPS23 ENSG00000181610.8 55927417 0.7 0.99 16074 4067
chr17 55938604 56032684 - CUEDC1 ENSG00000180891.8 56032684 0.72 1.0 16075 91008
chr17 56048910 56065620 - VEZF1 ENSG00000136451.4 56065620 0.72 1.0 16076 58072
chr17 56066399 56082614 - RP11-159D12.5 ENSG00000266086.1 56082614 0.91 0.79 16077 41078
chr17 56080721 56084707 - SRSF1 ENSG00000136450.8 56084707 0.64 0.99 16078 38985
Expression level of Genes
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miRNAs possibly regulated by vista25272[chr17:56023350-56023692]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results