EnhancerDB
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  3. rs140292889[chr17:56023378]
Enhancers that have rs140292889[chr17:56023378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 56023350 56023692 vista25272
VISTA
Transcript factors that have rs140292889[chr17:56023378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56023360 56023381 IRF1 JASPAR yes 21261652
chr17 56023360 56023381 IRF1 JASPAR yes 55003259
chr17 56023365 56023380 FOXP1 JASPAR yes 21261654
chr17 56023365 56023380 FOXP1 JASPAR yes 55003261
chr17 56023367 56023387 RREB1 JASPAR yes 21261655
chr17 56023367 56023387 RREB1 JASPAR yes 55003262
chr17 56023373 56023388 RUNX2 JASPAR yes 21261656
chr17 56023373 56023388 RUNX2 JASPAR yes 55003263
Genes associated with rs140292889[chr17:56023378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More