EnhancerDB
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  3. rs117638465[chr17:56023521]
Enhancers that have rs117638465[chr17:56023521]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 56023350 56023692 vista25272
VISTA
Transcript factors that have rs117638465[chr17:56023521]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56023519 56023529 ALX3 JASPAR yes 21261666
chr17 56023519 56023529 EMX1 JASPAR yes 21261667
chr17 56023519 56023529 HOXB2 JASPAR yes 21261668
chr17 56023519 56023529 HOXB3 JASPAR yes 21261669
chr17 56023519 56023529 MEOX2 JASPAR yes 21261670
chr17 56023519 56023529 MNX1 JASPAR yes 21261671
chr17 56023519 56023529 ALX3 JASPAR yes 55003273
chr17 56023519 56023529 EMX1 JASPAR yes 55003274
chr17 56023519 56023529 HOXB2 JASPAR yes 55003275
chr17 56023519 56023529 HOXB3 JASPAR yes 55003276
chr17 56023519 56023529 MEOX2 JASPAR yes 55003277
chr17 56023519 56023529 MNX1 JASPAR yes 55003278
chr17 56023520 56023528 LMX1A JASPAR yes 21261672
chr17 56023520 56023528 LMX1B JASPAR yes 21261673
chr17 56023520 56023528 NKX6-1 JASPAR yes 21261674
chr17 56023520 56023528 NKX6-2 JASPAR yes 21261675
chr17 56023520 56023528 PDX1 JASPAR yes 21261676
chr17 56023520 56023528 VAX1 JASPAR yes 21261677
chr17 56023520 56023528 VAX2 JASPAR yes 21261678
chr17 56023520 56023528 VSX1 JASPAR yes 21261679
chr17 56023520 56023528 LMX1A JASPAR yes 55003279
chr17 56023520 56023528 LMX1B JASPAR yes 55003280
chr17 56023520 56023528 NKX6-1 JASPAR yes 55003281
chr17 56023520 56023528 NKX6-2 JASPAR yes 55003282
chr17 56023520 56023528 PDX1 JASPAR yes 55003283
chr17 56023520 56023528 VAX1 JASPAR yes 55003284
chr17 56023520 56023528 VAX2 JASPAR yes 55003285
chr17 56023520 56023528 VSX1 JASPAR yes 55003286
chr17 56023520 56023531 FOXB1 JASPAR yes 21261680
chr17 56023520 56023531 FOXB1 JASPAR yes 55003287
Genes associated with rs117638465[chr17:56023521], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More