EnhancerDB
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  3. vista25346[chr17:57841314-57841767]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25346[chr17:57841314-57841767]
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Tissue distribution of vista25346
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Transcription factor that possibly regulate vista25346[chr17:57841314-57841767]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 57841305 57841317 PKNOX1 JASPAR yes 21265225
chr17 57841305 57841317 PKNOX2 JASPAR yes 21265226
chr17 57841305 57841317 TGIF1 JASPAR yes 21265227
chr17 57841305 57841317 TGIF2 JASPAR yes 21265228
chr17 57841305 57841317 PKNOX1 JASPAR yes 55079224
chr17 57841305 57841317 PKNOX2 JASPAR yes 55079225
chr17 57841305 57841317 TGIF1 JASPAR yes 55079226
chr17 57841305 57841317 TGIF2 JASPAR yes 55079227
chr17 57841311 57841315 NFE TRANSFAC yes 21265229
chr17 57841311 57841315 NFE TRANSFAC yes 55079228
chr17 57841345 57841349 YY1 TRANSFAC yes 21265230
chr17 57841345 57841349 YY1 TRANSFAC yes 55079229
chr17 57841350 57841353 MYB TRANSFAC yes 21265231
chr17 57841350 57841353 MYB TRANSFAC yes 55079230
chr17 57841425 57841443 IRF2 JASPAR yes 21265232
chr17 57841425 57841443 IRF2 JASPAR yes 55079231
chr17 57841429 57841443 STAT1 JASPAR yes 21265233
chr17 57841429 57841443 STAT1 JASPAR yes 55079232
chr17 57841435 57841439 YY1 TRANSFAC yes 21265234
chr17 57841435 57841439 YY1 TRANSFAC yes 55079233
chr17 57841436 57841450 IRF7 JASPAR yes 21265235
chr17 57841436 57841450 IRF7 JASPAR yes 55079234
chr17 57841443 57841454 CDX2 JASPAR yes 21265236
chr17 57841443 57841454 CDX2 JASPAR yes 55079235
chr17 57841444 57841457 JUN JASPAR yes 21265237
chr17 57841444 57841457 JUN JASPAR yes 55079236
chr17 57841446 57841461 JUND JASPAR yes 21265238
chr17 57841446 57841461 JUND JASPAR yes 55079237
chr17 57841483 57841495 TAL1 JASPAR yes 21265239
chr17 57841483 57841495 TAL1 JASPAR yes 55079238
chr17 57841485 57841495 FIGLA JASPAR yes 21265240
chr17 57841485 57841495 MSC JASPAR yes 21265241
chr17 57841485 57841495 MYF6 JASPAR yes 21265242
chr17 57841485 57841495 TFAP4 JASPAR yes 21265243
chr17 57841485 57841495 FIGLA JASPAR yes 55079239
chr17 57841485 57841495 MSC JASPAR yes 55079240
chr17 57841485 57841495 MYF6 JASPAR yes 55079241
chr17 57841485 57841495 TFAP4 JASPAR yes 55079242
chr17 57841485 57841497 TAL1 JASPAR yes 21265244
chr17 57841485 57841497 TAL1 JASPAR yes 55079243
chr17 57841497 57841504 NKX3-1 JASPAR yes 21265245
chr17 57841497 57841504 NKX3-1 JASPAR yes 55079244
chr17 57841546 57841559 ELF1 JASPAR yes 21265246
chr17 57841546 57841559 ELF1 JASPAR yes 55079245
chr17 57841550 57841558 EHF JASPAR yes 21265247
chr17 57841550 57841558 FEV JASPAR yes 21265248
chr17 57841550 57841558 EHF JASPAR yes 55079246
chr17 57841550 57841558 FEV JASPAR yes 55079247
chr17 57841551 57841558 SPI1 JASPAR yes 21265249
chr17 57841551 57841558 SPI1 JASPAR yes 55079248
chr17 57841570 57841575 ETS2 TRANSFAC yes 21265250
chr17 57841570 57841575 ETS2 TRANSFAC yes 55079249
chr17 57841574 57841586 HLF JASPAR yes 21265251
chr17 57841574 57841586 HLF JASPAR yes 55079250
chr17 57841581 57841584 MYB TRANSFAC yes 21265252
chr17 57841581 57841584 MYB TRANSFAC yes 55079251
chr17 57841595 57841609 FOXF2 JASPAR yes 21265253
chr17 57841595 57841609 FOXF2 JASPAR yes 55079252
chr17 57841595 57841610 FOXP1 JASPAR yes 21265254
chr17 57841595 57841610 FOXP1 JASPAR yes 55079253
chr17 57841597 57841608 FOXC1 JASPAR yes 21265255
chr17 57841597 57841608 FOXC1 JASPAR yes 55079254
chr17 57841597 57841609 FOXC2 JASPAR yes 21265256
chr17 57841597 57841609 FOXC2 JASPAR yes 55079255
chr17 57841600 57841621 IRF1 JASPAR yes 21265257
chr17 57841600 57841621 IRF1 JASPAR yes 55079256
chr17 57841603 57841617 IRF7 JASPAR yes 21265258
chr17 57841603 57841617 IRF7 JASPAR yes 55079257
chr17 57841604 57841619 PRDM1 JASPAR yes 21265259
chr17 57841604 57841619 STAT2 JASPAR yes 21265260
chr17 57841604 57841619 PRDM1 JASPAR yes 55079258
chr17 57841604 57841619 STAT2 JASPAR yes 55079259
chr17 57841622 57841627 ETS2 TRANSFAC yes 21265261
chr17 57841622 57841627 ETS2 TRANSFAC yes 55079260
chr17 57841632 57841644 ZBTB7C JASPAR yes 21265262
chr17 57841632 57841644 ZBTB7C JASPAR yes 55079261
chr17 57841633 57841645 ZBTB7A JASPAR yes 21265263
chr17 57841633 57841645 ZBTB7A JASPAR yes 55079262
chr17 57841636 57841651 RFX5 JASPAR yes 21265264
chr17 57841636 57841651 RFX5 JASPAR yes 55079263
chr17 57841659 57841667 SP1 TRANSFAC yes 21265265
chr17 57841659 57841667 SP1 TRANSFAC yes 55079264
chr17 57841661 57841667 MAZ TRANSFAC yes 21265266
chr17 57841661 57841667 MAZ TRANSFAC yes 55079265
chr17 57841661 57841672 E2F6 JASPAR yes 21265267
chr17 57841661 57841672 E2F6 JASPAR yes 55079266
chr17 57841678 57841685 SPIB JASPAR yes 21265268
chr17 57841678 57841685 SPIB JASPAR yes 55079267
chr17 57841698 57841708 HOXA13 JASPAR yes 21265269
chr17 57841698 57841708 HOXB13 JASPAR yes 21265270
chr17 57841698 57841708 HOXD13 JASPAR yes 21265271
chr17 57841698 57841708 HOXA13 JASPAR yes 55079268
chr17 57841698 57841708 HOXB13 JASPAR yes 55079269
chr17 57841698 57841708 HOXD13 JASPAR yes 55079270
chr17 57841698 57841709 HOXC13 JASPAR yes 21265272
chr17 57841698 57841709 HOXC13 JASPAR yes 55079271
chr17 57841699 57841711 SRF JASPAR yes 21265273
chr17 57841699 57841711 SRF JASPAR yes 55079272
chr17 57841702 57841706 TEAD2 TRANSFAC yes 21265274
chr17 57841702 57841706 TEAD2 TRANSFAC yes 55079273
chr17 57841712 57841717 SP1 TRANSFAC yes 21265275
chr17 57841712 57841717 SP1 TRANSFAC yes 55079274
chr17 57841727 57841737 SMAD3 JASPAR yes 21265276
chr17 57841727 57841737 SMAD3 JASPAR yes 55079275
SNP sites on vista25346[chr17:57841314-57841767]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 57841322 rs16943842 A G no 4961556
chr17 57841357 rs1874548 A G no 4961557
chr17 57841640 rs142536526 G A
RFX5 ZBTB7A ZBTB7C
4961558
Genes possibly regulated by vista25346[chr17:57841314-57841767]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 57751997 57784987 - PTRH2 ENSG00000141378.13 57784987 0.88 1.0 16105 43673
chr17 57784553 57919616 + VMP1 ENSG00000062716.6 57784553 0.71 0.99 16106 43239
Expression level of Genes
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miRNAs possibly regulated by vista25346[chr17:57841314-57841767]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 57918672 57918692 + hsa-miR-21-3p MIMAT0004494 57915291 0.022109959757884337 0.710898 0.678791 730
Expression level of miRNAs
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