EnhancerDB
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  3. rs142536526[chr17:57841640]
Enhancers that have rs142536526[chr17:57841640]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr17 57841314 57841767 vista25346
VISTA
Transcript factors that have rs142536526[chr17:57841640]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57841112 57841768 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108276705
chr17 57841155 57841695 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108276706
chr17 57841270 57841846 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108276711
chr17 57841457 57841787 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21775489
chr17 57841457 57841787 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108276714
chr17 57841632 57841644 ZBTB7C JASPAR yes 21265262
chr17 57841632 57841644 ZBTB7C JASPAR yes 55079261
chr17 57841633 57841645 ZBTB7A JASPAR yes 21265263
chr17 57841633 57841645 ZBTB7A JASPAR yes 55079262
chr17 57841636 57841651 RFX5 JASPAR yes 21265264
chr17 57841636 57841651 RFX5 JASPAR yes 55079263
Genes associated with rs142536526[chr17:57841640], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More