EnhancerDB
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  3. rs16943842[chr17:57841322]
Enhancers that have rs16943842[chr17:57841322]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr17 57841314 57841767 vista25346
VISTA
Transcript factors that have rs16943842[chr17:57841322]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57841082 57841632 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21775483
chr17 57841082 57841632 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108276704
chr17 57841112 57841768 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108276705
chr17 57841155 57841695 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108276706
chr17 57841232 57841588 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21775484
chr17 57841232 57841588 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108276707
chr17 57841237 57841581 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21775485
chr17 57841237 57841581 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108276708
chr17 57841253 57841583 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21775486
chr17 57841253 57841583 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108276709
chr17 57841266 57841606 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21775487
chr17 57841266 57841606 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108276710
chr17 57841270 57841846 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108276711
chr17 57841272 57841536 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21775488
chr17 57841272 57841536 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108276712
chr17 57841305 57841548 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108276713
Genes associated with rs16943842[chr17:57841322], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More