EnhancerDB
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  3. vista25505[chr17:62161129-62161576]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25505[chr17:62161129-62161576]
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Tissue distribution of vista25505
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Transcription factor that possibly regulate vista25505[chr17:62161129-62161576]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 62161138 62161148 TBR1 JASPAR yes 21273296
chr17 62161138 62161148 TBR1 JASPAR yes 55275416
chr17 62161138 62161149 TBX2 JASPAR yes 21273297
chr17 62161138 62161149 TBX2 JASPAR yes 55275417
chr17 62161141 62161151 ID4 JASPAR yes 21273298
chr17 62161141 62161151 TCF3 JASPAR yes 21273299
chr17 62161141 62161151 TCF4 JASPAR yes 21273300
chr17 62161141 62161151 ID4 JASPAR yes 55275418
chr17 62161141 62161151 TCF3 JASPAR yes 55275419
chr17 62161141 62161151 TCF4 JASPAR yes 55275420
chr17 62161142 62161151 SNAI2 JASPAR yes 21273301
chr17 62161142 62161151 SNAI2 JASPAR yes 55275421
chr17 62161143 62161148 USF2 TRANSFAC yes 21273302
chr17 62161143 62161148 USF2 TRANSFAC yes 55275422
chr17 62161163 62161178 JUND JASPAR yes 21273303
chr17 62161163 62161178 JUND JASPAR yes 55275423
chr17 62161164 62161177 JUN JASPAR yes 21273304
chr17 62161164 62161177 JUN JASPAR yes 55275424
chr17 62161165 62161179 ATF7 JASPAR yes 21273305
chr17 62161165 62161179 ATF7 JASPAR yes 55275425
chr17 62161167 62161180 NR2F1 JASPAR yes 21273306
chr17 62161167 62161180 NR2F1 JASPAR yes 55275426
chr17 62161168 62161176 CREB1 JASPAR yes 21273307
chr17 62161168 62161176 CREB1 JASPAR yes 55275427
chr17 62161169 62161177 NR4A2 JASPAR yes 21273308
chr17 62161169 62161177 NR4A2 JASPAR yes 55275428
chr17 62161170 62161187 RARA JASPAR yes 21273309
chr17 62161170 62161187 RARA JASPAR yes 55275429
chr17 62161171 62161175 ESR1 TRANSFAC yes 21273310
chr17 62161171 62161175 ESR1 TRANSFAC yes 55275430
chr17 62161222 62161237 FOXP1 JASPAR yes 21273311
chr17 62161222 62161237 FOXP1 JASPAR yes 55275431
chr17 62161224 62161227 MYB TRANSFAC yes 21273312
chr17 62161224 62161227 MYB TRANSFAC yes 55275432
chr17 62161247 62161252 ETS2 TRANSFAC yes 21273313
chr17 62161247 62161252 ETS2 TRANSFAC yes 55275433
chr17 62161250 62161256 SOX10 JASPAR yes 21273314
chr17 62161250 62161256 SOX10 JASPAR yes 55275434
chr17 62161256 62161267 ESRRB JASPAR yes 21273315
chr17 62161256 62161267 ESRRB JASPAR yes 55275435
chr17 62161258 62161276 RARA JASPAR yes 21273316
chr17 62161258 62161276 RARA JASPAR yes 55275436
chr17 62161283 62161287 YY1 TRANSFAC yes 21273317
chr17 62161283 62161287 YY1 TRANSFAC yes 55275437
chr17 62161288 62161292 NFE TRANSFAC yes 21273318
chr17 62161288 62161292 NFE TRANSFAC yes 55275438
chr17 62161291 62161297 MZF1 JASPAR yes 21273319
chr17 62161291 62161297 MZF1 JASPAR yes 55275439
chr17 62161313 62161334 ZNF263 JASPAR yes 21273320
chr17 62161313 62161334 ZNF263 JASPAR yes 55275440
chr17 62161314 62161320 MZF1 JASPAR yes 21273321
chr17 62161314 62161320 MZF1 JASPAR yes 55275441
chr17 62161318 62161329 E2F6 JASPAR yes 21273322
chr17 62161318 62161329 E2F6 JASPAR yes 55275442
chr17 62161337 62161343 PEA3 TRANSFAC yes 21273323
chr17 62161337 62161343 PEA3 TRANSFAC yes 55275443
chr17 62161354 62161375 ZNF263 JASPAR yes 21273324
chr17 62161354 62161375 ZNF263 JASPAR yes 55275444
chr17 62161384 62161394 MAX JASPAR yes 21273325
chr17 62161384 62161394 MAX JASPAR yes 55275445
chr17 62161399 62161403 TEAD2 TRANSFAC yes 21273326
chr17 62161399 62161403 TEAD2 TRANSFAC yes 55275446
chr17 62161401 62161404 MYB TRANSFAC yes 21273327
chr17 62161401 62161404 MYB TRANSFAC yes 55275447
chr17 62161413 62161416 MYB TRANSFAC yes 21273328
chr17 62161413 62161416 MYB TRANSFAC yes 55275448
chr17 62161413 62161422 RUNX2 JASPAR yes 21273329
chr17 62161413 62161422 RUNX2 JASPAR yes 55275449
chr17 62161413 62161423 RUNX3 JASPAR yes 21273330
chr17 62161413 62161423 RUNX3 JASPAR yes 55275450
chr17 62161413 62161424 RUNX1 JASPAR yes 21273331
chr17 62161413 62161424 RUNX1 JASPAR yes 55275451
chr17 62161434 62161455 ZNF263 JASPAR yes 21273332
chr17 62161434 62161455 ZNF263 JASPAR yes 55275452
chr17 62161435 62161456 REST JASPAR yes 21273333
chr17 62161435 62161456 REST JASPAR yes 55275453
chr17 62161436 62161446 SP1 JASPAR yes 21273334
chr17 62161436 62161446 SP1 JASPAR yes 55275454
chr17 62161447 62161451 H4TF2 TRANSFAC yes 21273335
chr17 62161447 62161451 H4TF2 TRANSFAC yes 55275455
chr17 62161472 62161477 SP1 TRANSFAC yes 21273336
chr17 62161472 62161477 SP1 TRANSFAC yes 55275456
chr17 62161481 62161495 E2F7 JASPAR yes 21273337
chr17 62161481 62161495 E2F7 JASPAR yes 55275457
chr17 62161482 62161494 E2F8 JASPAR yes 21273338
chr17 62161482 62161494 E2F8 JASPAR yes 55275458
chr17 62161519 62161524 SP1 TRANSFAC yes 21273339
chr17 62161519 62161524 SP1 TRANSFAC yes 55275459
chr17 62161526 62161530 NFE TRANSFAC yes 21273340
chr17 62161526 62161530 NFE TRANSFAC yes 55275460
chr17 62161558 62161572 SPIC JASPAR yes 21273341
chr17 62161558 62161572 SPIC JASPAR yes 55275461
chr17 62161566 62161570 YY1 TRANSFAC yes 21273342
chr17 62161566 62161570 YY1 TRANSFAC yes 55275462
chr17 62161567 62161577 HOXD13 JASPAR yes 21273343
chr17 62161567 62161577 HOXD13 JASPAR yes 55275463
chr17 62161567 62161578 HOXA10 JASPAR yes 21273344
chr17 62161567 62161578 HOXA10 JASPAR yes 55275464
chr17 62161574 62161577 MYB TRANSFAC yes 21273345
chr17 62161574 62161577 MYB TRANSFAC yes 55275465
SNP sites on vista25505[chr17:62161129-62161576]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 62161147 rs199622609 CTG C
ID4 SNAI2 TBR1 TBX2 TCF3 TCF4 USF2
4981624
chr17 62161238 rs185529661 G A no 4981625
chr17 62161272 rs76131554 T C
RARA
4981626
chr17 62161447 rs75738140 G A,C,T
H4TF2 REST ZNF263
4981627
chr17 62161454 rs2331414 T C
REST ZNF263
4981628
chr17 62161501 rs28429897 G C no 4981629
chr17 62161539 rs190400309 T C no 4981630
chr17 62161543 rs17641310 A G no 4981631
Genes possibly regulated by vista25505[chr17:62161129-62161576]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 62075711 62081664 + C17orf72 ENSG00000224383.3 62075711 0.87 0.98 16155 14582
chr17 62079954 62097994 - ICAM2 ENSG00000108622.6 62097994 0.8 0.95 16156 36865
chr17 62116502 62208179 - ERN1 ENSG00000178607.11 62208179 0.79 1.0 16157 53397
Expression level of Genes
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miRNAs possibly regulated by vista25505[chr17:62161129-62161576]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results