EnhancerDB
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  3. rs185529661[chr17:62161238]
Enhancers that have rs185529661[chr17:62161238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62157225 62175223 enh17290
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 62161129 62161576 vista25505
VISTA
Transcript factors that have rs185529661[chr17:62161238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62159832 62166447 ZNF143 GTRD no Epithelial (MCF-7) 21778613
chr17 62159832 62166447 ZNF143 GTRD no Epithelial (MCF-7) 108282222
chr17 62160289 62166431 ZNF143 GTRD no Epithelial (MCF-7) 21778614
chr17 62160289 62166431 ZNF143 GTRD no Epithelial (MCF-7) 108282223
chr17 62160339 62166409 ZNF143 GTRD no Epithelial (MCF-7) 21778615
chr17 62160339 62166409 ZNF143 GTRD no Epithelial (MCF-7) 108282224
chr17 62160430 62161365 ZNF143 GTRD no Epithelial (MCF-7) 21778616
chr17 62160430 62161365 ZNF143 GTRD no Epithelial (MCF-7) 108282225
chr17 62160631 62161353 TCF7L2 GTRD no Colon (HCT116) 21778618
chr17 62160631 62161353 TCF7L2 GTRD no Colon (HCT116) 108282227
chr17 62161146 62161610 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21778622
chr17 62161146 62161610 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108282231
Genes associated with rs185529661[chr17:62161238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More