EnhancerDB
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  3. vista27581[chr18:55880754-55881007]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27581[chr18:55880754-55881007]
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Tissue distribution of vista27581
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Transcription factor that possibly regulate vista27581[chr18:55880754-55881007]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55880796 55881025 RUNX3 UCSC Txn Factor no Conserved 108338144
chr18 55880748 55880758 TBX21 JASPAR yes 42714124
chr18 55880748 55880758 TBX21 JASPAR yes 110927548
chr18 55880762 55880777 AR JASPAR yes 42714125
chr18 55880762 55880777 AR JASPAR yes 110927549
chr18 55880769 55880782 POU2F2 JASPAR yes 42714126
chr18 55880769 55880782 POU2F2 JASPAR yes 110927550
chr18 55880794 55880815 ZNF263 JASPAR yes 42714127
chr18 55880794 55880815 ZNF263 JASPAR yes 110927551
chr18 55880814 55880831 ZNF410 JASPAR yes 42714128
chr18 55880814 55880831 ZNF410 JASPAR yes 110927552
chr18 55880820 55880831 FOXH1 JASPAR yes 42714129
chr18 55880820 55880831 FOXH1 JASPAR yes 110927553
chr18 55880820 55880836 ZNF143 JASPAR yes 42714130
chr18 55880820 55880836 ZNF143 JASPAR yes 110927554
chr18 55880828 55880833 SP1 TRANSFAC yes 42714131
chr18 55880828 55880833 SP1 TRANSFAC yes 110927555
chr18 55880847 55880858 NFKB1 JASPAR yes 42714132
chr18 55880847 55880858 NFKB1 JASPAR yes 110927556
chr18 55880848 55880858 RELA JASPAR yes 42714133
chr18 55880848 55880858 RELA JASPAR yes 110927557
chr18 55880850 55880855 H4TF1 TRANSFAC yes 42714134
chr18 55880850 55880855 H4TF1 TRANSFAC yes 110927558
chr18 55880858 55880875 PAX1 JASPAR yes 42714135
chr18 55880858 55880875 PAX1 JASPAR yes 110927559
chr18 55880866 55880882 SOX8 JASPAR yes 42714136
chr18 55880866 55880882 SOX8 JASPAR yes 110927560
chr18 55880880 55880895 RUNX2 JASPAR yes 42714137
chr18 55880880 55880895 RUNX2 JASPAR yes 110927561
chr18 55880881 55880884 MYB TRANSFAC yes 42714138
chr18 55880881 55880884 MYB TRANSFAC yes 110927562
chr18 55880885 55880899 SPI1 JASPAR yes 42714139
chr18 55880885 55880899 SPIC JASPAR yes 42714140
chr18 55880885 55880899 SPI1 JASPAR yes 110927563
chr18 55880885 55880899 SPIC JASPAR yes 110927564
chr18 55880889 55880895 MZF1 JASPAR yes 42714141
chr18 55880889 55880895 MZF1 JASPAR yes 110927565
chr18 55880893 55880897 YY1 TRANSFAC yes 42714142
chr18 55880893 55880897 YY1 TRANSFAC yes 110927566
chr18 55880893 55880908 FOXP1 JASPAR yes 42714143
chr18 55880893 55880908 FOXP1 JASPAR yes 110927567
chr18 55880908 55880913 ETS2 TRANSFAC yes 42714144
chr18 55880908 55880913 ETS2 TRANSFAC yes 110927568
chr18 55880918 55880933 RUNX2 JASPAR yes 42714145
chr18 55880918 55880933 RUNX2 JASPAR yes 110927569
chr18 55880922 55880932 RUNX3 JASPAR yes 42714146
chr18 55880922 55880932 RUNX3 JASPAR yes 110927570
chr18 55880923 55880932 RUNX2 JASPAR yes 42714147
chr18 55880923 55880932 RUNX2 JASPAR yes 110927571
chr18 55880928 55880939 RUNX1 JASPAR yes 42714148
chr18 55880928 55880939 RUNX1 JASPAR yes 110927572
chr18 55880954 55880960 MYC TRANSFAC yes 42714149
chr18 55880954 55880960 MYC TRANSFAC yes 110927573
chr18 55880956 55880976 RREB1 JASPAR yes 42714150
chr18 55880956 55880976 RREB1 JASPAR yes 110927574
chr18 55880966 55880986 RREB1 JASPAR yes 42714151
chr18 55880966 55880986 RREB1 JASPAR yes 110927575
chr18 55880968 55880988 RREB1 JASPAR yes 42714152
chr18 55880968 55880988 RREB1 JASPAR yes 110927576
chr18 55880971 55880991 RREB1 JASPAR yes 42714153
chr18 55880971 55880991 RREB1 JASPAR yes 110927577
chr18 55880974 55880994 RREB1 JASPAR yes 42714154
chr18 55880974 55880994 RREB1 JASPAR yes 110927578
chr18 55880975 55880981 TCF4 TRANSFAC yes 42714155
chr18 55880975 55880981 TCF4 TRANSFAC yes 110927579
chr18 55880977 55880997 RREB1 JASPAR yes 42714156
chr18 55880977 55880997 RREB1 JASPAR yes 110927580
chr18 55880983 55881004 IRF1 JASPAR yes 42714157
chr18 55880983 55881004 IRF1 JASPAR yes 110927581
chr18 55880984 55880999 FOXP1 JASPAR yes 42714158
chr18 55880984 55880999 FOXP1 JASPAR yes 110927582
chr18 55881000 55881015 HSF1 JASPAR yes 42714159
chr18 55881000 55881015 HSF1 JASPAR yes 110927583
chr18 55881000 55881020 TP63 JASPAR yes 42714160
chr18 55881000 55881020 TP63 JASPAR yes 110927584
chr18 55881001 55881014 HSF1 JASPAR yes 42714161
chr18 55881001 55881014 HSF4 JASPAR yes 42714162
chr18 55881001 55881014 HSF1 JASPAR yes 110927585
chr18 55881001 55881014 HSF4 JASPAR yes 110927586
chr18 55881003 55881018 TP53 JASPAR yes 42714163
chr18 55881003 55881018 TP53 JASPAR yes 110927587
SNP sites on vista27581[chr18:55880754-55881007]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55880900 rs78834884 T C
FOXP1 RUNX3
5282731
chr18 55880906 rs145911092 A C,G
FOXP1 RUNX3
5282732
chr18 55880961 rs369811866 A G
RREB1 RUNX3
5282733
chr18 55880992 rs562472974 T G
FOXP1 IRF1 RREB1 RUNX3
5282734
chr18 55881007 rs60827183 G A
HSF1 HSF4 RUNX3 TP53 TP63
5282735
Genes possibly regulated by vista27581[chr18:55880754-55881007]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista27581[chr18:55880754-55881007]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results