EnhancerDB
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Enhancers that have rs60827183[chr18:55881007]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55867165 55894619 enh32734
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
chr18 55880754 55881007 vista27581
VISTA
Transcript factors that have rs60827183[chr18:55881007]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55880796 55881025 RUNX3 UCSC Txn Factor no Conserved 108338144
chr18 55880796 55881025 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338145
chr18 55881000 55881015 HSF1 JASPAR yes 42714159
chr18 55881000 55881015 HSF1 JASPAR yes 110927583
chr18 55881000 55881020 TP63 JASPAR yes 42714160
chr18 55881000 55881020 TP63 JASPAR yes 110927584
chr18 55881001 55881014 HSF1 JASPAR yes 42714161
chr18 55881001 55881014 HSF4 JASPAR yes 42714162
chr18 55881001 55881014 HSF1 JASPAR yes 110927585
chr18 55881001 55881014 HSF4 JASPAR yes 110927586
chr18 55881003 55881018 TP53 JASPAR yes 42714163
chr18 55881003 55881018 TP53 JASPAR yes 110927587
Genes associated with rs60827183[chr18:55881007], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More