EnhancerDB
  1. Home
  2. Enhancers
  3. vista27629[chr18:56514801-56515232]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27629[chr18:56514801-56515232]
Back to top
Tissue distribution of vista27629
Back to top
Transcription factor that possibly regulate vista27629[chr18:56514801-56515232]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 56514813 56515053 EGR1 UCSC Txn Factor no Conserved 108338669
chr18 56514941 56515086 BACH1 UCSC Txn Factor no Conserved 108338675
chr18 56514827 56514839 HES5 JASPAR yes 42716263
chr18 56514827 56514839 HES7 JASPAR yes 42716264
chr18 56514827 56514839 HES5 JASPAR yes 110983142
chr18 56514827 56514839 HES7 JASPAR yes 110983143
chr18 56514833 56514854 REST JASPAR yes 42716265
chr18 56514833 56514854 REST JASPAR yes 110983144
chr18 56514850 56514862 FOXI1 JASPAR yes 42716266
chr18 56514850 56514862 FOXI1 JASPAR yes 110983145
chr18 56514854 56514860 HiNF-A TRANSFAC yes 42716267
chr18 56514854 56514860 HiNF-A TRANSFAC yes 110983146
chr18 56514864 56514879 MEF2A JASPAR yes 42716268
chr18 56514864 56514879 MEF2A JASPAR yes 110983147
chr18 56514866 56514878 MEF2A JASPAR yes 42716269
chr18 56514866 56514878 MEF2B JASPAR yes 42716270
chr18 56514866 56514878 MEF2D JASPAR yes 42716271
chr18 56514866 56514878 MEF2A JASPAR yes 110983148
chr18 56514866 56514878 MEF2B JASPAR yes 110983149
chr18 56514866 56514878 MEF2D JASPAR yes 110983150
chr18 56514867 56514877 MEF2A JASPAR yes 42716272
chr18 56514867 56514877 MEF2A JASPAR yes 110983151
chr18 56514884 56514888 NFE TRANSFAC yes 42716273
chr18 56514884 56514888 NFE TRANSFAC yes 110983152
chr18 56514889 56514899 ETV6 JASPAR yes 42716274
chr18 56514889 56514899 GABPA JASPAR yes 42716275
chr18 56514889 56514899 ETV6 JASPAR yes 110983153
chr18 56514889 56514899 GABPA JASPAR yes 110983154
chr18 56514889 56514900 ELK4 JASPAR yes 42716276
chr18 56514889 56514900 FLI1 JASPAR yes 42716277
chr18 56514889 56514900 ELK4 JASPAR yes 110983155
chr18 56514889 56514900 FLI1 JASPAR yes 110983156
chr18 56514891 56514897 ETS1 JASPAR yes 42716278
chr18 56514891 56514897 SPI1 JASPAR yes 42716279
chr18 56514891 56514897 ETS1 JASPAR yes 110983157
chr18 56514891 56514897 SPI1 JASPAR yes 110983158
chr18 56514920 56514932 E2F8 JASPAR yes 42716280
chr18 56514920 56514932 E2F8 JASPAR yes 110983159
chr18 56514922 56514933 E2F4 JASPAR yes 42716281
chr18 56514922 56514933 E2F4 JASPAR yes 110983160
chr18 56514928 56514939 E2F6 JASPAR yes 42716282
chr18 56514928 56514939 E2F6 JASPAR yes 110983161
chr18 56514930 56514951 ZNF263 JASPAR yes 42716283
chr18 56514930 56514951 ZNF263 JASPAR yes 110983162
chr18 56514932 56514942 SP1 JASPAR yes 42716284
chr18 56514932 56514942 SP1 JASPAR yes 110983163
chr18 56514936 56514944 SP1 TRANSFAC yes 42716285
chr18 56514936 56514944 WT1 TRANSFAC yes 42716286
chr18 56514936 56514944 SP1 TRANSFAC yes 110983164
chr18 56514936 56514944 WT1 TRANSFAC yes 110983165
chr18 56514938 56514945 SP1 TRANSFAC yes 42716287
chr18 56514938 56514945 SP1 TRANSFAC yes 110983166
chr18 56514939 56514953 PLAG1 JASPAR yes 42716288
chr18 56514939 56514953 PLAG1 JASPAR yes 110983167
chr18 56514940 56514945 SP1 TRANSFAC yes 42716289
chr18 56514940 56514945 SP1 TRANSFAC yes 110983168
chr18 56514947 56514952 SP1 TRANSFAC yes 42716290
chr18 56514947 56514952 SP1 TRANSFAC yes 110983169
chr18 56514977 56514983 MZF1 JASPAR yes 42716291
chr18 56514977 56514983 MZF1 JASPAR yes 110983170
chr18 56514985 56514998 NFKB1 JASPAR yes 42716292
chr18 56514985 56514998 NFKB2 JASPAR yes 42716293
chr18 56514985 56514998 NFKB1 JASPAR yes 110983171
chr18 56514985 56514998 NFKB2 JASPAR yes 110983172
chr18 56514988 56514993 GATA2 JASPAR yes 42716294
chr18 56514988 56514993 GATA2 JASPAR yes 110983173
chr18 56514990 56514999 ZEB1 JASPAR yes 42716295
chr18 56514990 56514999 ZEB1 JASPAR yes 110983174
chr18 56514990 56515002 PKNOX2 JASPAR yes 42716296
chr18 56514990 56515002 PKNOX2 JASPAR yes 110983175
chr18 56514991 56515001 ID4 JASPAR yes 42716297
chr18 56514991 56515001 TCF3 JASPAR yes 42716298
chr18 56514991 56515001 TCF4 JASPAR yes 42716299
chr18 56514991 56515001 ID4 JASPAR yes 110983176
chr18 56514991 56515001 TCF3 JASPAR yes 110983177
chr18 56514991 56515001 TCF4 JASPAR yes 110983178
chr18 56514992 56515001 SNAI2 JASPAR yes 42716300
chr18 56514992 56515001 SNAI2 JASPAR yes 110983179
chr18 56514993 56514998 USF2 TRANSFAC yes 42716301
chr18 56514993 56514998 USF2 TRANSFAC yes 110983180
chr18 56514996 56515010 CREB3 JASPAR yes 42716302
chr18 56514996 56515010 CREB3L1 JASPAR yes 42716303
chr18 56514996 56515010 CREB3 JASPAR yes 110983181
chr18 56514996 56515010 CREB3L1 JASPAR yes 110983182
chr18 56515003 56515013 TFAP4 JASPAR yes 42716304
chr18 56515003 56515013 TFAP4 JASPAR yes 110983183
chr18 56515012 56515026 GLIS2 JASPAR yes 42716305
chr18 56515012 56515026 ZIC1 JASPAR yes 42716306
chr18 56515012 56515026 GLIS2 JASPAR yes 110983184
chr18 56515012 56515026 ZIC1 JASPAR yes 110983185
chr18 56515012 56515027 ZIC3 JASPAR yes 42716307
chr18 56515012 56515027 ZIC4 JASPAR yes 42716308
chr18 56515012 56515027 ZIC3 JASPAR yes 110983186
chr18 56515012 56515027 ZIC4 JASPAR yes 110983187
chr18 56515013 56515024 E2F4 JASPAR yes 42716309
chr18 56515013 56515024 E2F4 JASPAR yes 110983188
chr18 56515028 56515042 NR2F1 JASPAR yes 42716310
chr18 56515028 56515042 NR2F1 JASPAR yes 110983189
chr18 56515042 56515053 ESRRB JASPAR yes 42716311
chr18 56515042 56515053 ESRRB JASPAR yes 110983190
chr18 56515046 56515050 ESR1 TRANSFAC yes 42716312
chr18 56515046 56515050 ESR1 TRANSFAC yes 110983191
chr18 56515071 56515092 REST JASPAR yes 42716313
chr18 56515071 56515092 REST JASPAR yes 110983192
chr18 56515073 56515077 YY1 TRANSFAC yes 42716314
chr18 56515073 56515077 YY1 TRANSFAC yes 110983193
chr18 56515098 56515112 ZIC1 JASPAR yes 42716315
chr18 56515098 56515112 ZIC1 JASPAR yes 110983194
chr18 56515098 56515113 ZIC3 JASPAR yes 42716316
chr18 56515098 56515113 ZIC4 JASPAR yes 42716317
chr18 56515098 56515113 ZIC3 JASPAR yes 110983195
chr18 56515098 56515113 ZIC4 JASPAR yes 110983196
chr18 56515099 56515109 ZNF740 JASPAR yes 42716318
chr18 56515099 56515109 ZNF740 JASPAR yes 110983197
chr18 56515117 56515127 TEAD1 JASPAR yes 42716319
chr18 56515117 56515127 TEAD4 JASPAR yes 42716320
chr18 56515117 56515127 TEAD1 JASPAR yes 110983198
chr18 56515117 56515127 TEAD4 JASPAR yes 110983199
chr18 56515132 56515144 POU2F1 JASPAR yes 42716321
chr18 56515132 56515144 POU2F1 JASPAR yes 110983200
chr18 56515132 56515145 POU3F3 JASPAR yes 42716322
chr18 56515132 56515145 POU3F3 JASPAR yes 110983201
chr18 56515132 56515146 POU1F1 JASPAR yes 42716323
chr18 56515132 56515146 POU1F1 JASPAR yes 110983202
chr18 56515133 56515145 POU3F1 JASPAR yes 42716324
chr18 56515133 56515145 POU3F2 JASPAR yes 42716325
chr18 56515133 56515145 POU3F1 JASPAR yes 110983203
chr18 56515133 56515145 POU3F2 JASPAR yes 110983204
chr18 56515134 56515143 POU3F4 JASPAR yes 42716326
chr18 56515134 56515143 POU5F1B JASPAR yes 42716327
chr18 56515134 56515143 POU3F4 JASPAR yes 110983205
chr18 56515134 56515143 POU5F1B JASPAR yes 110983206
chr18 56515146 56515156 ALX3 JASPAR yes 42716328
chr18 56515146 56515156 MIXL1 JASPAR yes 42716329
chr18 56515146 56515156 ALX3 JASPAR yes 110983207
chr18 56515146 56515156 MIXL1 JASPAR yes 110983208
chr18 56515147 56515155 LHX9 JASPAR yes 42716330
chr18 56515147 56515155 SHOX JASPAR yes 42716331
chr18 56515147 56515155 LHX9 JASPAR yes 110983209
chr18 56515147 56515155 SHOX JASPAR yes 110983210
chr18 56515148 56515159 PHOX2A JASPAR yes 42716332
chr18 56515148 56515159 PROP1 JASPAR yes 42716333
chr18 56515148 56515159 PHOX2A JASPAR yes 110983211
chr18 56515148 56515159 PROP1 JASPAR yes 110983212
chr18 56515159 56515163 NFE TRANSFAC yes 42716334
chr18 56515159 56515163 NFE TRANSFAC yes 110983213
chr18 56515160 56515170 SMAD3 JASPAR yes 42716335
chr18 56515160 56515170 SMAD3 JASPAR yes 110983214
chr18 56515165 56515185 TP63 JASPAR yes 42716336
chr18 56515165 56515185 TP63 JASPAR yes 110983215
chr18 56515186 56515192 SOX10 JASPAR yes 42716337
chr18 56515186 56515192 SOX10 JASPAR yes 110983216
chr18 56515196 56515216 PPARG JASPAR yes 42716338
chr18 56515196 56515216 PPARG JASPAR yes 110983217
chr18 56515199 56515214 HNF4A JASPAR yes 42716339
chr18 56515199 56515214 HNF4A JASPAR yes 110983218
chr18 56515200 56515214 NR2F1 JASPAR yes 42716340
chr18 56515200 56515214 NR2F1 JASPAR yes 110983219
chr18 56515200 56515215 HNF4G JASPAR yes 42716341
chr18 56515200 56515215 HNF4G JASPAR yes 110983220
chr18 56515227 56515231 YY1 TRANSFAC yes 42716342
chr18 56515227 56515231 YY1 TRANSFAC yes 110983221
SNP sites on vista27629[chr18:56514801-56515232]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 56514938 rs560743199 CGG C
E2F6 EGR1 SP1 WT1 ZNF263
5288295
chr18 56514956 rs576161077 G A
BACH1 EGR1
5288296
chr18 56515068 rs79677206 G T
BACH1
5288297
chr18 56515100 rs369528108 A AC,ACC
ZIC1 ZIC3 ZIC4 ZNF740
5288298
chr18 56515100 rs531874356 A AC
ZIC1 ZIC3 ZIC4 ZNF740
5288299
chr18 56515100 rs74183300 A AC
ZIC1 ZIC3 ZIC4 ZNF740
5288300
chr18 56515133 rs558909868 G T
POU1F1 POU2F1 POU3F1 POU3F2 POU3F3
5288301
chr18 56515166 rs143553174 A G
SMAD3 TP63
5288302
Genes possibly regulated by vista27629[chr18:56514801-56515232]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 56529832 56653712 + ZNF532 ENSG00000074657.9 56529832 0.76 0.99 16614 85400
Expression level of Genes
Back to top
miRNAs possibly regulated by vista27629[chr18:56514801-56515232]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results