EnhancerDB
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  3. rs143553174[chr18:56515166]
Enhancers that have rs143553174[chr18:56515166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56508646 56521424 enh17749
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Neural Stem Cells (H9) Epithelial (MCF-7)
chr18 56514801 56515232 vista27629
VISTA
Transcript factors that have rs143553174[chr18:56515166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56514653 56515253 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824392
chr18 56514653 56515253 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338663
chr18 56514656 56515326 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824393
chr18 56514656 56515326 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338664
chr18 56514732 56515312 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824395
chr18 56514732 56515312 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338666
chr18 56514762 56515282 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824396
chr18 56514762 56515282 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338667
chr18 56514884 56515208 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824401
chr18 56514884 56515208 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338674
chr18 56514944 56515268 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824403
chr18 56514944 56515268 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338677
chr18 56514944 56515498 ZNF274 GTRD no Cervix (HeLa-S3) 21824404
chr18 56514944 56515498 ZNF274 GTRD no Cervix (HeLa-S3) 108338678
chr18 56514997 56515247 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824405
chr18 56514997 56515247 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338679
chr18 56515003 56515183 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824406
chr18 56515003 56515183 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338680
chr18 56515043 56515259 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824408
chr18 56515043 56515259 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338682
chr18 56515160 56515170 SMAD3 JASPAR yes 42716335
chr18 56515160 56515170 SMAD3 JASPAR yes 110983214
chr18 56515165 56515185 TP63 JASPAR yes 42716336
chr18 56515165 56515185 TP63 JASPAR yes 110983215
Genes associated with rs143553174[chr18:56515166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More