EnhancerDB
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  3. rs560743199[chr18:56514938]
Enhancers that have rs560743199[chr18:56514938]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56508646 56521424 enh17749
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Neural Stem Cells (H9) Epithelial (MCF-7)
chr18 56514801 56515232 vista27629
VISTA
Transcript factors that have rs560743199[chr18:56514938]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56514529 56515019 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824387
chr18 56514529 56515019 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338658
chr18 56514569 56514979 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824391
chr18 56514569 56514979 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338662
chr18 56514653 56515253 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824392
chr18 56514653 56515253 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338663
chr18 56514656 56515326 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824393
chr18 56514656 56515326 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338664
chr18 56514701 56514953 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824394
chr18 56514701 56514953 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338665
chr18 56514732 56515312 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824395
chr18 56514732 56515312 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338666
chr18 56514762 56515282 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824396
chr18 56514762 56515282 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338667
chr18 56514800 56515044 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824397
chr18 56514800 56515044 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338668
chr18 56514813 56515053 EGR1 UCSC Txn Factor no Conserved 108338669
chr18 56514813 56515053 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338670
chr18 56514834 56515033 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824398
chr18 56514834 56515033 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338671
chr18 56514838 56515148 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824399
chr18 56514838 56515148 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338672
chr18 56514879 56515139 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824400
chr18 56514879 56515139 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338673
chr18 56514884 56515208 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824401
chr18 56514884 56515208 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338674
chr18 56514928 56514939 E2F6 JASPAR yes 42716282
chr18 56514928 56514939 E2F6 JASPAR yes 110983161
chr18 56514930 56514951 ZNF263 JASPAR yes 42716283
chr18 56514930 56514951 ZNF263 JASPAR yes 110983162
chr18 56514932 56514942 SP1 JASPAR yes 42716284
chr18 56514932 56514942 SP1 JASPAR yes 110983163
chr18 56514936 56514944 SP1 TRANSFAC yes 42716285
chr18 56514936 56514944 WT1 TRANSFAC yes 42716286
chr18 56514936 56514944 SP1 TRANSFAC yes 110983164
chr18 56514936 56514944 WT1 TRANSFAC yes 110983165
chr18 56514938 56514945 SP1 TRANSFAC yes 42716287
chr18 56514938 56514945 SP1 TRANSFAC yes 110983166
Genes associated with rs560743199[chr18:56514938], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More