EnhancerDB
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  3. vista28233[chr19:2549602-2550221]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28233[chr19:2549602-2550221]
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Tissue distribution of vista28233
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Transcription factor that possibly regulate vista28233[chr19:2549602-2550221]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2549589 2549604 FOXP1 JASPAR yes 70783896
chr19 2549589 2549604 FOXP1 JASPAR yes 112073244
chr19 2549615 2549620 SP1 TRANSFAC yes 70783897
chr19 2549615 2549620 SP1 TRANSFAC yes 112073247
chr19 2549615 2549622 SP1 TRANSFAC yes 70783898
chr19 2549615 2549622 SP1 TRANSFAC yes 112073248
chr19 2549615 2549625 SP1 JASPAR yes 70783899
chr19 2549615 2549625 SP1 JASPAR yes 112073249
chr19 2549622 2549626 LFA1 TRANSFAC yes 70783900
chr19 2549622 2549626 LFA1 TRANSFAC yes 112073250
chr19 2549651 2549664 SMAD2 JASPAR yes 70783901
chr19 2549651 2549664 SMAD2 JASPAR yes 112073251
chr19 2549656 2549668 E2F8 JASPAR yes 70783902
chr19 2549656 2549668 E2F8 JASPAR yes 112073252
chr19 2549657 2549669 INSM1 JASPAR yes 70783903
chr19 2549657 2549669 INSM1 JASPAR yes 112073253
chr19 2549659 2549674 HSF1 JASPAR yes 70783904
chr19 2549659 2549674 HSF1 JASPAR yes 112073254
chr19 2549664 2549679 HSF1 JASPAR yes 70783905
chr19 2549664 2549679 HSF1 JASPAR yes 112073255
chr19 2549665 2549678 HSF1 JASPAR yes 70783906
chr19 2549665 2549678 HSF2 JASPAR yes 70783907
chr19 2549665 2549678 HSF4 JASPAR yes 70783908
chr19 2549665 2549678 HSF1 JASPAR yes 112073256
chr19 2549665 2549678 HSF2 JASPAR yes 112073257
chr19 2549665 2549678 HSF4 JASPAR yes 112073258
chr19 2549691 2549703 ZBTB7B JASPAR yes 70783909
chr19 2549691 2549703 ZBTB7C JASPAR yes 70783910
chr19 2549691 2549703 ZBTB7B JASPAR yes 112073259
chr19 2549691 2549703 ZBTB7C JASPAR yes 112073260
chr19 2549716 2549726 TFAP4 JASPAR yes 70783911
chr19 2549716 2549726 TFAP4 JASPAR yes 112073261
chr19 2549727 2549738 E2F6 JASPAR yes 70783912
chr19 2549727 2549738 E2F6 JASPAR yes 112073262
chr19 2549732 2549738 PEA3 TRANSFAC yes 70783913
chr19 2549732 2549738 PEA3 TRANSFAC yes 112073263
chr19 2549737 2549743 HiNF-A TRANSFAC yes 70783914
chr19 2549737 2549743 HiNF-A TRANSFAC yes 112073264
chr19 2549753 2549765 INSM1 JASPAR yes 70783915
chr19 2549753 2549765 INSM1 JASPAR yes 112073265
chr19 2549760 2549764 ESR1 TRANSFAC yes 70783916
chr19 2549760 2549764 ESR1 TRANSFAC yes 112073266
chr19 2549778 2549799 ZNF263 JASPAR yes 70783917
chr19 2549778 2549799 ZNF263 JASPAR yes 112073267
chr19 2549781 2549796 NR2C2 JASPAR yes 70783918
chr19 2549781 2549796 NR2C2 JASPAR yes 112073268
chr19 2549782 2549791 HiNF-C TRANSFAC yes 70783919
chr19 2549782 2549791 HiNF-C TRANSFAC yes 112073269
chr19 2549782 2549792 SP1 JASPAR yes 70783920
chr19 2549782 2549792 SP1 JASPAR yes 112073270
chr19 2549782 2549803 ZNF263 JASPAR yes 70783921
chr19 2549782 2549803 ZNF263 JASPAR yes 112073271
chr19 2549783 2549789 SP1 TRANSFAC yes 70783922
chr19 2549783 2549789 SP1 TRANSFAC yes 112073272
chr19 2549784 2549789 SP1 TRANSFAC yes 70783923
chr19 2549784 2549789 SP1 TRANSFAC yes 112073273
chr19 2549785 2549790 SP1 TRANSFAC yes 70783924
chr19 2549785 2549790 SP1 TRANSFAC yes 112073274
chr19 2549785 2549791 SP1 TRANSFAC yes 70783925
chr19 2549785 2549791 SP1 TRANSFAC yes 112073275
chr19 2549788 2549802 PLAG1 JASPAR yes 70783926
chr19 2549788 2549802 PLAG1 JASPAR yes 112073276
chr19 2549792 2549800 MEIS3 JASPAR yes 70783927
chr19 2549792 2549800 MEIS3 JASPAR yes 112073277
chr19 2549807 2549822 SCRT1 JASPAR yes 70783928
chr19 2549807 2549822 SCRT1 JASPAR yes 112073278
chr19 2549809 2549822 SCRT2 JASPAR yes 70783929
chr19 2549809 2549822 SCRT2 JASPAR yes 112073279
chr19 2549818 2549833 AR JASPAR yes 70783930
chr19 2549818 2549833 AR JASPAR yes 112073280
chr19 2549822 2549828 SOX10 JASPAR yes 70783931
chr19 2549822 2549828 SOX10 JASPAR yes 112073281
chr19 2549828 2549833 ETS2 TRANSFAC yes 70783932
chr19 2549828 2549833 ETS2 TRANSFAC yes 112073282
chr19 2549850 2549857 E2F1 TRANSFAC yes 70783933
chr19 2549850 2549857 E2F1 TRANSFAC yes 112073283
chr19 2549851 2549866 HNF4A JASPAR yes 70783934
chr19 2549851 2549866 HNF4A JASPAR yes 112073284
chr19 2549852 2549867 HNF4G JASPAR yes 70783935
chr19 2549852 2549867 HNF4G JASPAR yes 112073285
chr19 2549858 2549862 NFE TRANSFAC yes 70783936
chr19 2549858 2549862 NFE TRANSFAC yes 112073286
chr19 2549888 2549898 TEAD4 JASPAR yes 70783937
chr19 2549888 2549898 TEAD4 JASPAR yes 112073287
chr19 2549889 2549900 NFKB1 JASPAR yes 70783938
chr19 2549889 2549900 NFKB1 JASPAR yes 112073288
chr19 2549898 2549901 MYB TRANSFAC yes 70783939
chr19 2549898 2549901 MYB TRANSFAC yes 112073289
chr19 2549904 2549924 RREB1 JASPAR yes 70783940
chr19 2549904 2549924 RREB1 JASPAR yes 112073290
chr19 2549910 2549925 RUNX2 JASPAR yes 70783941
chr19 2549910 2549925 RUNX2 JASPAR yes 112073291
chr19 2549914 2549924 RUNX3 JASPAR yes 70783942
chr19 2549914 2549924 RUNX3 JASPAR yes 112073292
chr19 2549915 2549924 RUNX2 JASPAR yes 70783943
chr19 2549915 2549924 RUNX2 JASPAR yes 112073293
chr19 2549934 2549948 SPI1 JASPAR yes 70783944
chr19 2549934 2549948 SPIC JASPAR yes 70783945
chr19 2549934 2549948 SPI1 JASPAR yes 112073294
chr19 2549934 2549948 SPIC JASPAR yes 112073295
chr19 2549952 2549956 NFE TRANSFAC yes 70783946
chr19 2549952 2549956 NFE TRANSFAC yes 112073296
chr19 2549953 2549958 GATA2 JASPAR yes 70783947
chr19 2549953 2549958 GATA2 JASPAR yes 112073297
chr19 2549957 2549967 TEAD1 JASPAR yes 70783948
chr19 2549957 2549967 TEAD4 JASPAR yes 70783949
chr19 2549957 2549967 TEAD1 JASPAR yes 112073298
chr19 2549957 2549967 TEAD4 JASPAR yes 112073299
chr19 2549958 2549969 PHOX2A JASPAR yes 70783950
chr19 2549958 2549969 PROP1 JASPAR yes 70783951
chr19 2549958 2549969 PHOX2A JASPAR yes 112073300
chr19 2549958 2549969 PROP1 JASPAR yes 112073301
chr19 2549964 2549968 YY1 TRANSFAC yes 70783952
chr19 2549964 2549968 YY1 TRANSFAC yes 112073302
chr19 2549985 2550006 REST JASPAR yes 70783953
chr19 2549985 2550006 REST JASPAR yes 112073303
chr19 2550010 2550016 NFE2 TRANSFAC yes 70783954
chr19 2550010 2550016 NFE2 TRANSFAC yes 112073304
chr19 2550010 2550022 INSM1 JASPAR yes 70783955
chr19 2550010 2550022 INSM1 JASPAR yes 112073305
chr19 2550012 2550025 ELF1 JASPAR yes 70783956
chr19 2550012 2550025 ELF1 JASPAR yes 112073306
chr19 2550013 2550025 EHF JASPAR yes 70783957
chr19 2550013 2550025 ELF1 JASPAR yes 70783958
chr19 2550013 2550025 ELF4 JASPAR yes 70783959
chr19 2550013 2550025 EHF JASPAR yes 112073307
chr19 2550013 2550025 ELF1 JASPAR yes 112073308
chr19 2550013 2550025 ELF4 JASPAR yes 112073309
chr19 2550014 2550025 ELF5 JASPAR yes 70783960
chr19 2550014 2550025 ELF5 JASPAR yes 112073310
chr19 2550015 2550022 ETS1 TRANSFAC yes 70783961
chr19 2550015 2550022 ETS1 TRANSFAC yes 112073311
chr19 2550015 2550025 ETV6 JASPAR yes 70783962
chr19 2550015 2550025 GABPA JASPAR yes 70783963
chr19 2550015 2550025 ETV6 JASPAR yes 112073312
chr19 2550015 2550025 GABPA JASPAR yes 112073313
chr19 2550015 2550026 ELK4 JASPAR yes 70783964
chr19 2550015 2550026 FLI1 JASPAR yes 70783965
chr19 2550015 2550026 ELK4 JASPAR yes 112073314
chr19 2550015 2550026 FLI1 JASPAR yes 112073315
chr19 2550016 2550024 EHF JASPAR yes 70783966
chr19 2550016 2550024 FEV JASPAR yes 70783967
chr19 2550016 2550024 EHF JASPAR yes 112073316
chr19 2550016 2550024 FEV JASPAR yes 112073317
chr19 2550017 2550024 SPI1 JASPAR yes 70783968
chr19 2550017 2550024 SPI1 JASPAR yes 112073318
chr19 2550035 2550041 ETS1 JASPAR yes 70783969
chr19 2550035 2550041 ETS1 JASPAR yes 112073319
chr19 2550048 2550055 NFATC2 JASPAR yes 70783970
chr19 2550048 2550055 NFATC2 JASPAR yes 112073320
chr19 2550105 2550115 SP1 JASPAR yes 70783971
chr19 2550105 2550115 SP1 JASPAR yes 112073321
chr19 2550108 2550118 MZF1 JASPAR yes 70783972
chr19 2550108 2550118 MZF1 JASPAR yes 112073322
chr19 2550111 2550116 TFAP2A TRANSFAC yes 70783973
chr19 2550111 2550116 TFAP2A TRANSFAC yes 112073323
chr19 2550111 2550117 MZF1 JASPAR yes 70783974
chr19 2550111 2550117 MZF1 JASPAR yes 112073324
chr19 2550140 2550153 ELF1 JASPAR yes 70783975
chr19 2550140 2550153 ELF1 JASPAR yes 112073325
chr19 2550141 2550153 ELF4 JASPAR yes 70783976
chr19 2550141 2550153 ELF4 JASPAR yes 112073326
chr19 2550142 2550153 ETV2 JASPAR yes 70783977
chr19 2550142 2550153 ETV2 JASPAR yes 112073327
chr19 2550143 2550153 ELK1 JASPAR yes 70783978
chr19 2550143 2550153 ELK3 JASPAR yes 70783979
chr19 2550143 2550153 ERF JASPAR yes 70783980
chr19 2550143 2550153 ERG JASPAR yes 70783981
chr19 2550143 2550153 ETS1 JASPAR yes 70783982
chr19 2550143 2550153 ETV1 JASPAR yes 70783983
chr19 2550143 2550153 ETV3 JASPAR yes 70783984
chr19 2550143 2550153 ETV4 JASPAR yes 70783985
chr19 2550143 2550153 ETV6 JASPAR yes 70783986
chr19 2550143 2550153 FEV JASPAR yes 70783987
chr19 2550143 2550153 FLI1 JASPAR yes 70783988
chr19 2550143 2550153 GABPA JASPAR yes 70783989
chr19 2550143 2550153 ELK1 JASPAR yes 112073328
chr19 2550143 2550153 ELK3 JASPAR yes 112073329
chr19 2550143 2550153 ERF JASPAR yes 112073330
chr19 2550143 2550153 ERG JASPAR yes 112073331
chr19 2550143 2550153 ETS1 JASPAR yes 112073332
chr19 2550143 2550153 ETV1 JASPAR yes 112073333
chr19 2550143 2550153 ETV3 JASPAR yes 112073334
chr19 2550143 2550153 ETV4 JASPAR yes 112073335
chr19 2550143 2550153 ETV6 JASPAR yes 112073336
chr19 2550143 2550153 FEV JASPAR yes 112073337
chr19 2550143 2550153 FLI1 JASPAR yes 112073338
chr19 2550143 2550153 GABPA JASPAR yes 112073339
chr19 2550143 2550154 ELK4 JASPAR yes 70783990
chr19 2550143 2550154 FLI1 JASPAR yes 70783991
chr19 2550143 2550154 ELK4 JASPAR yes 112073340
chr19 2550143 2550154 FLI1 JASPAR yes 112073341
chr19 2550144 2550152 EHF JASPAR yes 70783992
chr19 2550144 2550152 FEV JASPAR yes 70783993
chr19 2550144 2550152 EHF JASPAR yes 112073342
chr19 2550144 2550152 FEV JASPAR yes 112073343
chr19 2550145 2550152 SPI1 JASPAR yes 70783994
chr19 2550145 2550152 SPI1 JASPAR yes 112073344
chr19 2550152 2550164 TEAD1 JASPAR yes 70783995
chr19 2550152 2550164 TEAD1 JASPAR yes 112073345
chr19 2550197 2550211 ZIC1 JASPAR yes 70783996
chr19 2550197 2550211 ZIC1 JASPAR yes 112073346
chr19 2550197 2550212 ZIC4 JASPAR yes 70783997
chr19 2550197 2550212 ZIC4 JASPAR yes 112073347
chr19 2550198 2550211 TFAP2A JASPAR yes 70783998
chr19 2550198 2550211 TFAP2A JASPAR yes 112073348
SNP sites on vista28233[chr19:2549602-2550221]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2549615 rs7259367 C T
SP1
5385625
chr19 2549630 rs375842215 G C,T no 5385626
chr19 2549701 rs149672848 G A
ZBTB7B ZBTB7C
5385627
chr19 2549709 rs144175856 T TACCAGGC no 5385628
chr19 2549709 rs371759526 T TACCAGGC no 5385629
chr19 2549740 rs4505449 A C
HiNF-A
5385630
chr19 2549755 rs185443189 G A
INSM1
5385631
chr19 2549915 rs75484337 T C
RREB1 RUNX2 RUNX3
5385632
chr19 2549953 rs149214984 C T
GATA2 NFE
5385633
chr19 2549970 rs555050518 C T no 5385634
chr19 2550038 rs8112408 T G
ETS1
5385635
chr19 2550041 rs188395519 G A
ETS1
5385636
chr19 2550096 rs10421139 C T no 5385637
chr19 2550107 rs758473 T C
SP1
5385638
chr19 2550122 rs758474 G C no 5385639
chr19 2550138 rs758475 T C no 5385640
chr19 2550148 rs181566009 G A
EHF ELF1 ELF4 ELK1 ELK3 ELK4 ERF ERG ETS1 ETV1 ETV2 ETV3 ETV4 ETV6 FEV FLI1 GABPA SPI1
5385641
chr19 2550154 rs142473876 G A
ELK4 FLI1 TEAD1
5385642
chr19 2550166 rs4993719 C A,G no 5385643
chr19 2550176 rs376679719 G A,T no 5385644
chr19 2550204 rs186594303 C A,T
TFAP2A ZIC1 ZIC4
5385645
chr19 2550206 rs2010172 G A
TFAP2A ZIC1 ZIC4
5385646
Genes possibly regulated by vista28233[chr19:2549602-2550221]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2427636 2456994 - LMNB2 ENSG00000176619.6 2456994 0.77 1.0 16784 7392
chr19 2476120 2478257 + GADD45B ENSG00000099860.4 2476120 0.77 1.0 16785 26518
Expression level of Genes
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miRNAs possibly regulated by vista28233[chr19:2549602-2550221]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results