EnhancerDB
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  3. rs181566009[chr19:2550148]
Enhancers that have rs181566009[chr19:2550148]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 2549602 2550221 vista28233
VISTA
Transcript factors that have rs181566009[chr19:2550148]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2549419 2550424 ZNF274 GTRD no Blood (GM12878) 108362402
chr19 2549494 2550157 ZBTB33 GTRD no Brain (SK-N-SH) 21837094
chr19 2549494 2550157 ZBTB33 GTRD no Brain (SK-N-SH) 108362404
chr19 2549577 2550159 TEF1 GTRD no Bone (Osteoblast) 21837096
chr19 2549577 2550159 TEF1 GTRD no Bone (Osteoblast) 108362406
chr19 2549615 2550204 ZNF274 GTRD no Bone Marrow (K562) 21837097
chr19 2549615 2550204 ZNF274 GTRD no Bone Marrow (K562) 108362407
chr19 2549623 2550230 ZNF274 GTRD no Blood (GM12878) 108362408
chr19 2549894 2551536 TCF7L2 GTRD no Colon (HCT116) 21837099
chr19 2549894 2551536 TCF7L2 GTRD no Colon (HCT116) 108362410
chr19 2550042 2551338 TCF7L2 GTRD no Colon (HCT116) 21837100
chr19 2550042 2551338 TCF7L2 GTRD no Colon (HCT116) 108362411
chr19 2550074 2551502 TCF7L2 GTRD no Colon (HCT116) 21837101
chr19 2550074 2551502 TCF7L2 GTRD no Colon (HCT116) 108362412
chr19 2550082 2550304 ZNF274 GTRD no Blood (GM12878) 108362413
chr19 2550140 2550153 ELF1 JASPAR yes 70783975
chr19 2550140 2550153 ELF1 JASPAR yes 112073325
chr19 2550141 2550153 ELF4 JASPAR yes 70783976
chr19 2550141 2550153 ELF4 JASPAR yes 112073326
chr19 2550142 2550153 ETV2 JASPAR yes 70783977
chr19 2550142 2550153 ETV2 JASPAR yes 112073327
chr19 2550143 2550153 ELK1 JASPAR yes 70783978
chr19 2550143 2550153 ELK3 JASPAR yes 70783979
chr19 2550143 2550153 ERF JASPAR yes 70783980
chr19 2550143 2550153 ERG JASPAR yes 70783981
chr19 2550143 2550153 ETS1 JASPAR yes 70783982
chr19 2550143 2550153 ETV1 JASPAR yes 70783983
chr19 2550143 2550153 ETV3 JASPAR yes 70783984
chr19 2550143 2550153 ETV4 JASPAR yes 70783985
chr19 2550143 2550153 ETV6 JASPAR yes 70783986
chr19 2550143 2550153 FEV JASPAR yes 70783987
chr19 2550143 2550153 FLI1 JASPAR yes 70783988
chr19 2550143 2550153 GABPA JASPAR yes 70783989
chr19 2550143 2550153 ELK1 JASPAR yes 112073328
chr19 2550143 2550153 ELK3 JASPAR yes 112073329
chr19 2550143 2550153 ERF JASPAR yes 112073330
chr19 2550143 2550153 ERG JASPAR yes 112073331
chr19 2550143 2550153 ETS1 JASPAR yes 112073332
chr19 2550143 2550153 ETV1 JASPAR yes 112073333
chr19 2550143 2550153 ETV3 JASPAR yes 112073334
chr19 2550143 2550153 ETV4 JASPAR yes 112073335
chr19 2550143 2550153 ETV6 JASPAR yes 112073336
chr19 2550143 2550153 FEV JASPAR yes 112073337
chr19 2550143 2550153 FLI1 JASPAR yes 112073338
chr19 2550143 2550153 GABPA JASPAR yes 112073339
chr19 2550143 2550154 ELK4 JASPAR yes 70783990
chr19 2550143 2550154 FLI1 JASPAR yes 70783991
chr19 2550143 2550154 ELK4 JASPAR yes 112073340
chr19 2550143 2550154 FLI1 JASPAR yes 112073341
chr19 2550144 2550152 EHF JASPAR yes 70783992
chr19 2550144 2550152 FEV JASPAR yes 70783993
chr19 2550144 2550152 EHF JASPAR yes 112073342
chr19 2550144 2550152 FEV JASPAR yes 112073343
chr19 2550145 2550152 SPI1 JASPAR yes 70783994
chr19 2550145 2550152 SPI1 JASPAR yes 112073344
Genes associated with rs181566009[chr19:2550148], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More