EnhancerDB
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  3. vista2959[chr1:112058803-112059167]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2959[chr1:112058803-112059167]
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Tissue distribution of vista2959
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Transcription factor that possibly regulate vista2959[chr1:112058803-112059167]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 112058592 112059178 CTCF UCSC Txn Factor no Conserved 107822236
chr1 112058592 112059178 CTCF UCSC Txn Factor no Conserved 107822237
chr1 112058815 112058828 ELF1 JASPAR yes 31525279
chr1 112058815 112058828 ELF1 JASPAR yes 118352140
chr1 112058816 112058829 ELF3 JASPAR yes 31525280
chr1 112058816 112058829 ELF3 JASPAR yes 118352141
chr1 112058817 112058828 ELF5 JASPAR yes 31525281
chr1 112058817 112058828 ELF5 JASPAR yes 118352142
chr1 112058818 112058829 ELK4 JASPAR yes 31525282
chr1 112058818 112058829 FLI1 JASPAR yes 31525283
chr1 112058818 112058829 ELK4 JASPAR yes 118352143
chr1 112058818 112058829 FLI1 JASPAR yes 118352144
chr1 112058835 112058839 LFA1 TRANSFAC yes 31525284
chr1 112058835 112058839 LFA1 TRANSFAC yes 118352145
chr1 112058838 112058842 YY1 TRANSFAC yes 31525285
chr1 112058838 112058842 YY1 TRANSFAC yes 118352146
chr1 112058866 112058880 SPIC JASPAR yes 31525286
chr1 112058866 112058880 SPIC JASPAR yes 118352147
chr1 112058869 112058880 ELF5 JASPAR yes 31525287
chr1 112058869 112058880 ELF5 JASPAR yes 118352148
chr1 112058871 112058876 ETS2 TRANSFAC yes 31525288
chr1 112058871 112058876 ETS2 TRANSFAC yes 118352149
chr1 112058871 112058879 FEV JASPAR yes 31525289
chr1 112058871 112058879 FEV JASPAR yes 118352150
chr1 112058872 112058879 SPI1 JASPAR yes 31525290
chr1 112058872 112058879 SPI1 JASPAR yes 118352151
chr1 112058873 112058891 ESR1 JASPAR yes 31525291
chr1 112058873 112058891 ESR1 JASPAR yes 118352152
chr1 112058889 112058904 MEF2C JASPAR yes 31525292
chr1 112058889 112058904 MEF2C JASPAR yes 118352153
chr1 112058890 112058905 MEF2A JASPAR yes 31525293
chr1 112058890 112058905 MEF2A JASPAR yes 118352154
chr1 112058891 112058903 MEF2A JASPAR yes 31525294
chr1 112058891 112058903 MEF2B JASPAR yes 31525295
chr1 112058891 112058903 MEF2D JASPAR yes 31525296
chr1 112058891 112058903 MEF2A JASPAR yes 118352155
chr1 112058891 112058903 MEF2B JASPAR yes 118352156
chr1 112058891 112058903 MEF2D JASPAR yes 118352157
chr1 112058892 112058902 MEF2A JASPAR yes 31525297
chr1 112058892 112058902 MEF2A JASPAR yes 118352158
chr1 112058899 112058918 CTCF JASPAR yes 31525298
chr1 112058899 112058918 CTCF JASPAR yes 118352159
chr1 112058905 112058911 SP1 TRANSFAC yes 31525299
chr1 112058905 112058911 SP1 TRANSFAC yes 118352160
chr1 112058913 112058917 ESR1 TRANSFAC yes 31525300
chr1 112058913 112058917 ESR1 TRANSFAC yes 118352161
chr1 112058922 112058943 ZNF263 JASPAR yes 31525301
chr1 112058922 112058943 ZNF263 JASPAR yes 118352162
chr1 112058925 112058931 PEA3 TRANSFAC yes 31525302
chr1 112058925 112058931 PEA3 TRANSFAC yes 118352163
chr1 112058958 112058969 FOSL2 JASPAR yes 31525303
chr1 112058958 112058969 FOSL2 JASPAR yes 118352164
chr1 112058959 112058965 YY1 JASPAR yes 31525304
chr1 112058959 112058965 YY1 JASPAR yes 118352165
chr1 112058961 112058973 TFAP2A JASPAR yes 31525305
chr1 112058961 112058973 TFAP2B JASPAR yes 31525306
chr1 112058961 112058973 TFAP2C JASPAR yes 31525307
chr1 112058961 112058973 TFAP2A JASPAR yes 118352166
chr1 112058961 112058973 TFAP2B JASPAR yes 118352167
chr1 112058961 112058973 TFAP2C JASPAR yes 118352168
chr1 112058967 112058981 XBP1 JASPAR yes 31525308
chr1 112058967 112058981 XBP1 JASPAR yes 118352169
chr1 112058968 112058982 CREB3 JASPAR yes 31525309
chr1 112058968 112058982 CREB3 JASPAR yes 118352170
chr1 112058973 112058978 ATF1 TRANSFAC yes 31525310
chr1 112058973 112058978 ATF1 TRANSFAC yes 118352171
chr1 112059027 112059041 GATA2 JASPAR yes 31525311
chr1 112059027 112059041 GATA2 JASPAR yes 118352172
chr1 112059031 112059039 GATA5 JASPAR yes 31525312
chr1 112059031 112059039 GATA5 JASPAR yes 118352173
chr1 112059037 112059052 MAFK JASPAR yes 31525313
chr1 112059037 112059052 MAFK JASPAR yes 118352174
chr1 112059054 112059060 NFIC JASPAR yes 31525314
chr1 112059054 112059060 NFIC JASPAR yes 118352175
chr1 112059057 112059069 PROX1 JASPAR yes 31525315
chr1 112059057 112059069 PROX1 JASPAR yes 118352176
chr1 112059078 112059088 ETV6 JASPAR yes 31525316
chr1 112059078 112059088 GABPA JASPAR yes 31525317
chr1 112059078 112059088 ETV6 JASPAR yes 118352177
chr1 112059078 112059088 GABPA JASPAR yes 118352178
chr1 112059080 112059086 ETS1 JASPAR yes 31525318
chr1 112059080 112059086 SPI1 JASPAR yes 31525319
chr1 112059080 112059086 ETS1 JASPAR yes 118352179
chr1 112059080 112059086 SPI1 JASPAR yes 118352180
chr1 112059083 112059088 SP1 TRANSFAC yes 31525320
chr1 112059083 112059088 SP1 TRANSFAC yes 118352181
chr1 112059083 112059089 SP1 TRANSFAC yes 31525321
chr1 112059083 112059089 SP1 TRANSFAC yes 118352182
chr1 112059094 112059104 NEUROG2 JASPAR yes 31525322
chr1 112059094 112059104 NEUROG2 JASPAR yes 118352183
chr1 112059098 112059113 STAT2 JASPAR yes 31525323
chr1 112059098 112059113 STAT2 JASPAR yes 118352184
chr1 112059103 112059110 SPIB JASPAR yes 31525324
chr1 112059103 112059110 SPIB JASPAR yes 118352185
chr1 112059132 112059143 ESRRB JASPAR yes 31525325
chr1 112059132 112059143 ESRRB JASPAR yes 118352186
chr1 112059148 112059152 YY1 TRANSFAC yes 31525326
chr1 112059148 112059152 YY1 TRANSFAC yes 118352187
chr1 112059153 112059162 THAP1 JASPAR yes 31525327
chr1 112059153 112059162 THAP1 JASPAR yes 118352188
SNP sites on vista2959[chr1:112058803-112059167]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 112058812 rs566839597 G C
CTCF
559265
chr1 112058839 rs188801721 C A
CTCF LFA1 YY1
559266
chr1 112058854 rs191694268 A T
CTCF
559267
chr1 112058998 rs142545035 TCAG T
CTCF
559268
chr1 112058998 rs796067344 TCAG T
CTCF
559269
chr1 112059055 rs367569195 T C
CTCF NFIC
559270
chr1 112059148 rs12138958 G C
CTCF YY1
559271
chr1 112059153 rs564389737 T C
CTCF THAP1
559272
Genes possibly regulated by vista2959[chr1:112058803-112059167]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 111956936 111970399 - OVGP1 ENSG00000085465.11 111970399 0.95 1.0 1013 11596
chr1 111982512 111991998 - WDR77 ENSG00000116455.9 111991998 0.82 0.98 1014 33195
chr1 111991486 112005395 + ATP5F1 ENSG00000116459.6 111991486 0.83 0.99 1015 32683
chr1 112016414 112021134 + C1orf162 ENSG00000143110.7 112016414 0.89 1.0 1016 57611
chr1 112025970 112106584 - ADORA3 ENSG00000121933.13 112106584 0.72 0.99 1017 52583
chr1 112084840 112259313 + RAP1A ENSG00000116473.10 112084840 0.71 0.99 1018 74327
Expression level of Genes
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miRNAs possibly regulated by vista2959[chr1:112058803-112059167]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results