EnhancerDB
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  3. rs12138958[chr1:112059148]
Enhancers that have rs12138958[chr1:112059148]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 112044245 112062755 enh565
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 112058803 112059167 vista2959
VISTA
Transcript factors that have rs12138958[chr1:112059148]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 112058520 112059180 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329351
chr1 112058520 112059180 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822228
chr1 112058520 112059180 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822229
chr1 112058541 112059670 P63 GTRD no Skin (Keratinocyte) 21329352
chr1 112058541 112059670 P63 GTRD no Skin (Keratinocyte) 107822230
chr1 112058541 112059670 P63 GTRD no Skin (Keratinocyte) 107822231
chr1 112058581 112059575 P63 GTRD no Skin (Keratinocyte) 21329353
chr1 112058581 112059575 P63 GTRD no Skin (Keratinocyte) 107822232
chr1 112058581 112059575 P63 GTRD no Skin (Keratinocyte) 107822233
chr1 112058589 112059482 P63 GTRD no Skin (Keratinocyte) 21329354
chr1 112058589 112059482 P63 GTRD no Skin (Keratinocyte) 107822234
chr1 112058589 112059482 P63 GTRD no Skin (Keratinocyte) 107822235
chr1 112058592 112059178 CTCF UCSC Txn Factor no Conserved 107822236
chr1 112058592 112059178 CTCF UCSC Txn Factor no Conserved 107822237
chr1 112058724 112059660 ZNF143 GTRD no Epithelial (MCF-7) 21329358
chr1 112058724 112059660 ZNF143 GTRD no Epithelial (MCF-7) 107822242
chr1 112058753 112059593 P63 GTRD no Skin (Keratinocyte) 21329360
chr1 112058753 112059593 P63 GTRD no Skin (Keratinocyte) 107822244
chr1 112058881 112059617 ZNF274 GTRD no Cervix (HeLa-S3) 21329366
chr1 112058881 112059617 ZNF274 GTRD no Cervix (HeLa-S3) 107822253
chr1 112058882 112059475 ZNF274 GTRD no Bone Marrow (K562) 21329367
chr1 112058882 112059475 ZNF274 GTRD no Bone Marrow (K562) 107822254
chr1 112058890 112059637 ZNF274 GTRD no Bone Marrow (K562) 21329368
chr1 112058890 112059637 ZNF274 GTRD no Bone Marrow (K562) 107822255
chr1 112058911 112059700 ZBTB33 GTRD no Lung (A549) 107822256
chr1 112058918 112059174 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21329369
chr1 112058918 112059174 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107822257
chr1 112058937 112059554 ZNF143 GTRD no Epithelial (MCF-7) 21329370
chr1 112058937 112059554 ZNF143 GTRD no Epithelial (MCF-7) 107822258
chr1 112058949 112059675 ZNF143 GTRD no Epithelial (MCF-7) 21329371
chr1 112058949 112059675 ZNF143 GTRD no Epithelial (MCF-7) 107822259
chr1 112058955 112059380 ZNF143 GTRD no Epithelial (MCF-7) 21329372
chr1 112058955 112059380 ZNF143 GTRD no Epithelial (MCF-7) 107822260
chr1 112058955 112059530 ZNF143 GTRD no Epithelial (MCF-7) 21329373
chr1 112058955 112059530 ZNF143 GTRD no Epithelial (MCF-7) 107822261
chr1 112058956 112059381 ZNF274 GTRD no Bone Marrow (K562) 21329374
chr1 112058956 112059381 ZNF274 GTRD no Bone Marrow (K562) 107822262
chr1 112058968 112059535 ZNF143 GTRD no Epithelial (MCF-7) 21329375
chr1 112058968 112059535 ZNF143 GTRD no Epithelial (MCF-7) 107822263
chr1 112058978 112059422 ZBTB33 GTRD no Lung (A549) 107822264
chr1 112059000 112059353 ZNF143 GTRD no Epithelial (MCF-7) 21329376
chr1 112059000 112059353 ZNF143 GTRD no Epithelial (MCF-7) 107822265
chr1 112059001 112059445 ZNF274 GTRD no Liver (HepG2) 107822266
chr1 112059006 112059449 ZNF274 GTRD no Bone Marrow (K562) 21329377
chr1 112059006 112059449 ZNF274 GTRD no Bone Marrow (K562) 107822267
chr1 112059010 112059340 ZNF143 GTRD no Epithelial (MCF-7) 21329378
chr1 112059010 112059340 ZNF143 GTRD no Epithelial (MCF-7) 107822268
chr1 112059024 112059503 ZNF274 GTRD no Bone Marrow (K562) 21329379
chr1 112059024 112059503 ZNF274 GTRD no Bone Marrow (K562) 107822269
chr1 112059038 112059445 ZNF274 GTRD no Bone Marrow (K562) 21329380
chr1 112059038 112059445 ZNF274 GTRD no Bone Marrow (K562) 107822270
chr1 112059040 112059362 ZNF274 GTRD no Liver (HepG2) 107822271
chr1 112059049 112059385 ZNF274 GTRD no Liver (HepG2) 107822272
chr1 112059053 112059390 ZNF274 GTRD no Liver (HepG2) 107822273
chr1 112059075 112059571 ZBTB33 GTRD no Lung (A549) 107822274
chr1 112059093 112059494 ZNF274 GTRD no Bone Marrow (K562) 21329381
chr1 112059093 112059494 ZNF274 GTRD no Bone Marrow (K562) 107822275
chr1 112059126 112059424 ZNF274 GTRD no Bone Marrow (K562) 21329382
chr1 112059126 112059424 ZNF274 GTRD no Bone Marrow (K562) 107822276
chr1 112059148 112059152 YY1 TRANSFAC yes 31525326
chr1 112059148 112059152 YY1 TRANSFAC yes 118352187
Genes associated with rs12138958[chr1:112059148], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More