EnhancerDB
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  3. rs188801721[chr1:112058839]
Enhancers that have rs188801721[chr1:112058839]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 112044245 112062755 enh565
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 112058803 112059167 vista2959
VISTA
Transcript factors that have rs188801721[chr1:112058839]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 112058520 112059180 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329351
chr1 112058520 112059180 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822228
chr1 112058520 112059180 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822229
chr1 112058541 112059670 P63 GTRD no Skin (Keratinocyte) 21329352
chr1 112058541 112059670 P63 GTRD no Skin (Keratinocyte) 107822230
chr1 112058541 112059670 P63 GTRD no Skin (Keratinocyte) 107822231
chr1 112058581 112059575 P63 GTRD no Skin (Keratinocyte) 21329353
chr1 112058581 112059575 P63 GTRD no Skin (Keratinocyte) 107822232
chr1 112058581 112059575 P63 GTRD no Skin (Keratinocyte) 107822233
chr1 112058589 112059482 P63 GTRD no Skin (Keratinocyte) 21329354
chr1 112058589 112059482 P63 GTRD no Skin (Keratinocyte) 107822234
chr1 112058589 112059482 P63 GTRD no Skin (Keratinocyte) 107822235
chr1 112058592 112059178 CTCF UCSC Txn Factor no Conserved 107822236
chr1 112058592 112059178 CTCF UCSC Txn Factor no Conserved 107822237
chr1 112058640 112059004 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329355
chr1 112058640 112059004 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822238
chr1 112058665 112059035 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21329356
chr1 112058665 112059035 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107822239
chr1 112058683 112059013 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107822240
chr1 112058705 112058981 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21329357
chr1 112058705 112058981 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107822241
chr1 112058724 112059660 ZNF143 GTRD no Epithelial (MCF-7) 21329358
chr1 112058724 112059660 ZNF143 GTRD no Epithelial (MCF-7) 107822242
chr1 112058725 112059085 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329359
chr1 112058725 112059085 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822243
chr1 112058753 112059593 P63 GTRD no Skin (Keratinocyte) 21329360
chr1 112058753 112059593 P63 GTRD no Skin (Keratinocyte) 107822244
chr1 112058754 112059044 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107822245
chr1 112058765 112059055 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21329361
chr1 112058765 112059055 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107822246
chr1 112058776 112059046 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107822247
chr1 112058781 112059031 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21329362
chr1 112058781 112059031 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107822248
chr1 112058784 112059014 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107822249
chr1 112058791 112059035 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21329363
chr1 112058791 112059035 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107822250
chr1 112058791 112059071 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21329364
chr1 112058791 112059071 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107822251
chr1 112058811 112059015 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21329365
chr1 112058811 112059015 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107822252
chr1 112058835 112058839 LFA1 TRANSFAC yes 31525284
chr1 112058835 112058839 LFA1 TRANSFAC yes 118352145
chr1 112058838 112058842 YY1 TRANSFAC yes 31525285
chr1 112058838 112058842 YY1 TRANSFAC yes 118352146
Genes associated with rs188801721[chr1:112058839], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More