EnhancerDB
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  3. vista3027[chr1:115709526-115709713]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3027[chr1:115709526-115709713]
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Tissue distribution of vista3027
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Transcription factor that possibly regulate vista3027[chr1:115709526-115709713]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 115709534 115709546 TGIF1 JASPAR yes 31713293
chr1 115709534 115709546 TGIF1 JASPAR yes 118355210
chr1 115709558 115709563 ETS2 TRANSFAC yes 31713294
chr1 115709558 115709563 ETS2 TRANSFAC yes 118355211
chr1 115709558 115709573 FOXP1 JASPAR yes 31713295
chr1 115709558 115709573 FOXP1 JASPAR yes 118355212
chr1 115709561 115709572 FOXP2 JASPAR yes 31713296
chr1 115709561 115709572 FOXP2 JASPAR yes 118355213
chr1 115709562 115709577 LEF1 JASPAR yes 31713297
chr1 115709562 115709577 LEF1 JASPAR yes 118355214
chr1 115709563 115709572 SRY JASPAR yes 31713298
chr1 115709563 115709572 SRY JASPAR yes 118355215
chr1 115709566 115709580 SPIC JASPAR yes 31713299
chr1 115709566 115709580 SPIC JASPAR yes 118355216
chr1 115709567 115709573 SOX10 JASPAR yes 31713300
chr1 115709567 115709573 SOX10 JASPAR yes 118355217
chr1 115709572 115709577 ETS2 TRANSFAC yes 31713301
chr1 115709572 115709577 ETS2 TRANSFAC yes 118355218
chr1 115709572 115709584 TEAD1 JASPAR yes 31713302
chr1 115709572 115709584 TEAD1 JASPAR yes 118355219
chr1 115709575 115709590 SOX21 JASPAR yes 31713303
chr1 115709575 115709590 SOX21 JASPAR yes 118355220
chr1 115709583 115709593 RELA JASPAR yes 31713304
chr1 115709583 115709593 REL JASPAR yes 31713305
chr1 115709583 115709593 RELA JASPAR yes 118355221
chr1 115709583 115709593 REL JASPAR yes 118355222
chr1 115709583 115709594 NFKB1 JASPAR yes 31713306
chr1 115709583 115709594 NFKB1 JASPAR yes 118355223
chr1 115709586 115709597 ETV2 JASPAR yes 31713307
chr1 115709586 115709597 ETV2 JASPAR yes 118355224
chr1 115709598 115709609 FLI1 JASPAR yes 31713308
chr1 115709598 115709609 FLI1 JASPAR yes 118355225
chr1 115709599 115709609 ERF JASPAR yes 31713309
chr1 115709599 115709609 ERG JASPAR yes 31713310
chr1 115709599 115709609 ETS1 JASPAR yes 31713311
chr1 115709599 115709609 FLI1 JASPAR yes 31713312
chr1 115709599 115709609 ERF JASPAR yes 118355226
chr1 115709599 115709609 ERG JASPAR yes 118355227
chr1 115709599 115709609 ETS1 JASPAR yes 118355228
chr1 115709599 115709609 FLI1 JASPAR yes 118355229
chr1 115709599 115709610 ELF5 JASPAR yes 31713313
chr1 115709599 115709610 ETV2 JASPAR yes 31713314
chr1 115709599 115709610 ELF5 JASPAR yes 118355230
chr1 115709599 115709610 ETV2 JASPAR yes 118355231
chr1 115709600 115709608 FEV JASPAR yes 31713315
chr1 115709600 115709608 FEV JASPAR yes 118355232
chr1 115709614 115709618 YY1 TRANSFAC yes 31713316
chr1 115709614 115709618 YY1 TRANSFAC yes 118355233
chr1 115709713 115709727 BATF3 JASPAR yes 31713317
chr1 115709713 115709727 BATF3 JASPAR yes 118355234
SNP sites on vista3027[chr1:115709526-115709713]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 115709588 rs11273321 G GTTTCCTGTTAGAA
ETV2 NFKB1 REL RELA SOX21
578204
chr1 115709588 rs147480372 G GTTTCCTGTTAGAA
ETV2 NFKB1 REL RELA SOX21
578205
chr1 115709675 rs139297088 G A,C no 578206
Genes possibly regulated by vista3027[chr1:115709526-115709713]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 115590632 115632121 - TSPAN2 ENSG00000134198.5 115632121 0.89 0.99 1052 22595
Expression level of Genes
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miRNAs possibly regulated by vista3027[chr1:115709526-115709713]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results