EnhancerDB
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  3. rs147480372[chr1:115709588]
Enhancers that have rs147480372[chr1:115709588]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115706465 115714135 enh12174
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Epithelial (MCF-7)
chr1 115709526 115709713 vista3027
VISTA
Transcript factors that have rs147480372[chr1:115709588]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 115709397 115709733 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21330707
chr1 115709397 115709733 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107823457
chr1 115709561 115715466 ZNF143 GTRD no Epithelial (MCF-7) 21330708
chr1 115709561 115715466 ZNF143 GTRD no Epithelial (MCF-7) 107823458
chr1 115709561 115715466 ZNF143 GTRD no Epithelial (MCF-7) 107823459
chr1 115709575 115709590 SOX21 JASPAR yes 31713303
chr1 115709575 115709590 SOX21 JASPAR yes 118355220
chr1 115709583 115709593 RELA JASPAR yes 31713304
chr1 115709583 115709593 REL JASPAR yes 31713305
chr1 115709583 115709593 RELA JASPAR yes 118355221
chr1 115709583 115709593 REL JASPAR yes 118355222
chr1 115709583 115709594 NFKB1 JASPAR yes 31713306
chr1 115709583 115709594 NFKB1 JASPAR yes 118355223
chr1 115709586 115709597 ETV2 JASPAR yes 31713307
chr1 115709586 115709597 ETV2 JASPAR yes 118355224
Genes associated with rs147480372[chr1:115709588], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More