EnhancerDB
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  3. rs139297088[chr1:115709675]
Enhancers that have rs139297088[chr1:115709675]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115706465 115714135 enh12174
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Epithelial (MCF-7)
chr1 115709526 115709713 vista3027
VISTA
Transcript factors that have rs139297088[chr1:115709675]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 115709397 115709733 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21330707
chr1 115709397 115709733 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107823457
chr1 115709561 115715466 ZNF143 GTRD no Epithelial (MCF-7) 21330708
chr1 115709561 115715466 ZNF143 GTRD no Epithelial (MCF-7) 107823458
chr1 115709561 115715466 ZNF143 GTRD no Epithelial (MCF-7) 107823459
Genes associated with rs139297088[chr1:115709675], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More