EnhancerDB
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  3. vista35500[chr2:240199614-240199929]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35500[chr2:240199614-240199929]
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Tissue distribution of vista35500
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Transcription factor that possibly regulate vista35500[chr2:240199614-240199929]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 240199602 240199622 RREB1 JASPAR yes 22245761
chr2 240199602 240199622 RREB1 JASPAR yes 82225028
chr2 240199605 240199619 PLAG1 JASPAR yes 22245762
chr2 240199605 240199619 PLAG1 JASPAR yes 82225029
chr2 240199605 240199620 RFX5 JASPAR yes 22245763
chr2 240199605 240199620 RFX5 JASPAR yes 82225030
chr2 240199606 240199626 RREB1 JASPAR yes 22245764
chr2 240199606 240199626 RREB1 JASPAR yes 82225031
chr2 240199609 240199624 RUNX2 JASPAR yes 22245765
chr2 240199609 240199624 RUNX2 JASPAR yes 82225032
chr2 240199615 240199635 RREB1 JASPAR yes 22245766
chr2 240199615 240199635 RREB1 JASPAR yes 82225033
chr2 240199622 240199637 RUNX2 JASPAR yes 22245767
chr2 240199622 240199637 RUNX2 JASPAR yes 82225034
chr2 240199628 240199648 RREB1 JASPAR yes 22245768
chr2 240199628 240199648 RREB1 JASPAR yes 82225035
chr2 240199673 240199688 RUNX2 JASPAR yes 22245769
chr2 240199673 240199688 RUNX2 JASPAR yes 82225036
chr2 240199677 240199697 RREB1 JASPAR yes 22245770
chr2 240199677 240199697 RREB1 JASPAR yes 82225037
chr2 240199679 240199699 RREB1 JASPAR yes 22245771
chr2 240199679 240199699 RREB1 JASPAR yes 82225038
chr2 240199682 240199696 PLAG1 JASPAR yes 22245772
chr2 240199682 240199696 PLAG1 JASPAR yes 82225039
chr2 240199682 240199697 RFX5 JASPAR yes 22245773
chr2 240199682 240199697 RFX5 JASPAR yes 82225040
chr2 240199683 240199703 RREB1 JASPAR yes 22245774
chr2 240199683 240199703 RREB1 JASPAR yes 82225041
chr2 240199686 240199701 RUNX2 JASPAR yes 22245775
chr2 240199686 240199701 RUNX2 JASPAR yes 82225042
chr2 240199690 240199710 RREB1 JASPAR yes 22245776
chr2 240199690 240199710 RREB1 JASPAR yes 82225043
chr2 240199692 240199712 RREB1 JASPAR yes 22245777
chr2 240199692 240199712 RREB1 JASPAR yes 82225044
chr2 240199695 240199709 PLAG1 JASPAR yes 22245778
chr2 240199695 240199709 PLAG1 JASPAR yes 82225045
chr2 240199695 240199710 RFX5 JASPAR yes 22245779
chr2 240199695 240199710 RFX5 JASPAR yes 82225046
chr2 240199696 240199716 RREB1 JASPAR yes 22245780
chr2 240199696 240199716 RREB1 JASPAR yes 82225047
chr2 240199699 240199714 RUNX2 JASPAR yes 22245781
chr2 240199699 240199714 RUNX2 JASPAR yes 82225048
chr2 240199708 240199723 RFX5 JASPAR yes 22245782
chr2 240199708 240199723 RFX5 JASPAR yes 82225049
chr2 240199765 240199779 ZIC1 JASPAR yes 22245783
chr2 240199765 240199779 ZIC1 JASPAR yes 82225050
chr2 240199765 240199780 ZIC3 JASPAR yes 22245784
chr2 240199765 240199780 ZIC4 JASPAR yes 22245785
chr2 240199765 240199780 ZIC3 JASPAR yes 82225051
chr2 240199765 240199780 ZIC4 JASPAR yes 82225052
chr2 240199785 240199790 USF2 TRANSFAC yes 22245786
chr2 240199785 240199790 USF2 TRANSFAC yes 82225053
chr2 240199791 240199809 ESR2 JASPAR yes 22245787
chr2 240199791 240199809 ESR2 JASPAR yes 82225054
chr2 240199793 240199813 ESR1 JASPAR yes 22245788
chr2 240199793 240199813 ESR1 JASPAR yes 82225055
chr2 240199809 240199815 HiNF-A TRANSFAC yes 22245789
chr2 240199809 240199815 HiNF-A TRANSFAC yes 82225056
chr2 240199812 240199827 SCRT1 JASPAR yes 22245790
chr2 240199812 240199827 SCRT1 JASPAR yes 82225057
chr2 240199816 240199825 SNAI2 JASPAR yes 22245791
chr2 240199816 240199825 SNAI2 JASPAR yes 82225058
chr2 240199816 240199826 FIGLA JASPAR yes 22245792
chr2 240199816 240199826 ID4 JASPAR yes 22245793
chr2 240199816 240199826 MSC JASPAR yes 22245794
chr2 240199816 240199826 MYF6 JASPAR yes 22245795
chr2 240199816 240199826 TCF3 JASPAR yes 22245796
chr2 240199816 240199826 TCF4 JASPAR yes 22245797
chr2 240199816 240199826 FIGLA JASPAR yes 82225059
chr2 240199816 240199826 ID4 JASPAR yes 82225060
chr2 240199816 240199826 MSC JASPAR yes 82225061
chr2 240199816 240199826 MYF6 JASPAR yes 82225062
chr2 240199816 240199826 TCF3 JASPAR yes 82225063
chr2 240199816 240199826 TCF4 JASPAR yes 82225064
chr2 240199824 240199840 NFYA JASPAR yes 22245798
chr2 240199824 240199840 NFYA JASPAR yes 82225065
chr2 240199829 240199843 E2F7 JASPAR yes 22245799
chr2 240199829 240199843 E2F7 JASPAR yes 82225066
chr2 240199830 240199842 E2F8 JASPAR yes 22245800
chr2 240199830 240199842 E2F8 JASPAR yes 82225067
chr2 240199859 240199864 GATA2 JASPAR yes 22245801
chr2 240199859 240199864 GATA2 JASPAR yes 82225068
chr2 240199867 240199871 YY1 TRANSFAC yes 22245802
chr2 240199867 240199871 YY1 TRANSFAC yes 82225069
chr2 240199871 240199892 IRF1 JASPAR yes 22245803
chr2 240199871 240199892 IRF1 JASPAR yes 82225070
chr2 240199873 240199894 IRF1 JASPAR yes 22245804
chr2 240199873 240199894 IRF1 JASPAR yes 82225071
chr2 240199877 240199892 FOXP1 JASPAR yes 22245805
chr2 240199877 240199892 FOXP1 JASPAR yes 82225072
chr2 240199877 240199898 IRF1 JASPAR yes 22245806
chr2 240199877 240199898 IRF1 JASPAR yes 82225073
chr2 240199878 240199893 FOXP1 JASPAR yes 22245807
chr2 240199878 240199893 FOXP1 JASPAR yes 82225074
chr2 240199878 240199899 IRF1 JASPAR yes 22245808
chr2 240199878 240199899 IRF1 JASPAR yes 82225075
chr2 240199879 240199894 FOXP1 JASPAR yes 22245809
chr2 240199879 240199894 FOXP1 JASPAR yes 82225076
chr2 240199879 240199900 IRF1 JASPAR yes 22245810
chr2 240199879 240199900 IRF1 JASPAR yes 82225077
chr2 240199880 240199895 FOXP1 JASPAR yes 22245811
chr2 240199880 240199895 FOXP1 JASPAR yes 82225078
chr2 240199880 240199901 IRF1 JASPAR yes 22245812
chr2 240199880 240199901 IRF1 JASPAR yes 82225079
chr2 240199881 240199896 FOXP1 JASPAR yes 22245813
chr2 240199881 240199896 FOXP1 JASPAR yes 82225080
chr2 240199881 240199902 IRF1 JASPAR yes 22245814
chr2 240199881 240199902 IRF1 JASPAR yes 82225081
chr2 240199882 240199897 FOXP1 JASPAR yes 22245815
chr2 240199882 240199897 FOXP1 JASPAR yes 82225082
chr2 240199884 240199899 FOXP1 JASPAR yes 22245816
chr2 240199884 240199899 FOXP1 JASPAR yes 82225083
chr2 240199885 240199900 STAT2 JASPAR yes 22245817
chr2 240199885 240199900 STAT2 JASPAR yes 82225084
chr2 240199886 240199901 FOXP1 JASPAR yes 22245818
chr2 240199886 240199901 FOXP1 JASPAR yes 82225085
chr2 240199889 240199900 FOXP2 JASPAR yes 22245819
chr2 240199889 240199900 FOXP2 JASPAR yes 82225086
chr2 240199904 240199907 MYB TRANSFAC yes 22245820
chr2 240199904 240199907 MYB TRANSFAC yes 82225087
chr2 240199906 240199912 SOX10 JASPAR yes 22245821
chr2 240199906 240199912 SOX10 JASPAR yes 82225088
chr2 240199923 240199933 ZNF740 JASPAR yes 22245822
chr2 240199923 240199933 ZNF740 JASPAR yes 82225089
chr2 240199927 240199941 ATF7 JASPAR yes 22245823
chr2 240199927 240199941 BATF3 JASPAR yes 22245824
chr2 240199927 240199941 ATF7 JASPAR yes 82225090
chr2 240199927 240199941 BATF3 JASPAR yes 82225091
SNP sites on vista35500[chr2:240199614-240199929]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 240199636 rs575162219 C T
RREB1 RUNX2
6493466
chr2 240199685 rs536086673 C A
PLAG1 RFX5 RREB1 RUNX2
6493467
chr2 240199824 rs543102757 G T
FIGLA ID4 MSC MYF6 NFYA SCRT1 SNAI2 TCF3 TCF4
6493468
chr2 240199867 rs10674168 C CCACAGA
YY1
6493469
chr2 240199867 rs139651999 C CCACAGA
YY1
6493470
chr2 240199883 rs568234992 GA G
FOXP1 IRF1
6493471
Genes possibly regulated by vista35500[chr2:240199614-240199929]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista35500[chr2:240199614-240199929]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results