EnhancerDB
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  3. rs536086673[chr2:240199685]
Enhancers that have rs536086673[chr2:240199685]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 240199614 240199929 vista35500
VISTA
Transcript factors that have rs536086673[chr2:240199685]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240199673 240199688 RUNX2 JASPAR yes 22245769
chr2 240199673 240199688 RUNX2 JASPAR yes 82225036
chr2 240199677 240199697 RREB1 JASPAR yes 22245770
chr2 240199677 240199697 RREB1 JASPAR yes 82225037
chr2 240199679 240199699 RREB1 JASPAR yes 22245771
chr2 240199679 240199699 RREB1 JASPAR yes 82225038
chr2 240199682 240199696 PLAG1 JASPAR yes 22245772
chr2 240199682 240199696 PLAG1 JASPAR yes 82225039
chr2 240199682 240199697 RFX5 JASPAR yes 22245773
chr2 240199682 240199697 RFX5 JASPAR yes 82225040
chr2 240199683 240199703 RREB1 JASPAR yes 22245774
chr2 240199683 240199703 RREB1 JASPAR yes 82225041
Genes associated with rs536086673[chr2:240199685], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More