EnhancerDB
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  3. rs543102757[chr2:240199824]
Enhancers that have rs543102757[chr2:240199824]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 240199614 240199929 vista35500
VISTA
Transcript factors that have rs543102757[chr2:240199824]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240199812 240199827 SCRT1 JASPAR yes 22245790
chr2 240199812 240199827 SCRT1 JASPAR yes 82225057
chr2 240199816 240199825 SNAI2 JASPAR yes 22245791
chr2 240199816 240199825 SNAI2 JASPAR yes 82225058
chr2 240199816 240199826 FIGLA JASPAR yes 22245792
chr2 240199816 240199826 ID4 JASPAR yes 22245793
chr2 240199816 240199826 MSC JASPAR yes 22245794
chr2 240199816 240199826 MYF6 JASPAR yes 22245795
chr2 240199816 240199826 TCF3 JASPAR yes 22245796
chr2 240199816 240199826 TCF4 JASPAR yes 22245797
chr2 240199816 240199826 FIGLA JASPAR yes 82225059
chr2 240199816 240199826 ID4 JASPAR yes 82225060
chr2 240199816 240199826 MSC JASPAR yes 82225061
chr2 240199816 240199826 MYF6 JASPAR yes 82225062
chr2 240199816 240199826 TCF3 JASPAR yes 82225063
chr2 240199816 240199826 TCF4 JASPAR yes 82225064
chr2 240199824 240199840 NFYA JASPAR yes 22245798
chr2 240199824 240199840 NFYA JASPAR yes 82225065
Genes associated with rs543102757[chr2:240199824], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More