EnhancerDB
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  3. vista3920[chr1:172863432-172863838]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3920[chr1:172863432-172863838]
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Tissue distribution of vista3920
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Transcription factor that possibly regulate vista3920[chr1:172863432-172863838]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 172863413 172863434 ZNF263 JASPAR yes 33162280
chr1 172863413 172863434 ZNF263 JASPAR yes 118400350
chr1 172863430 172863438 FOXL1 JASPAR yes 33162281
chr1 172863430 172863438 FOXL1 JASPAR yes 118400351
chr1 172863444 172863449 GATA2 JASPAR yes 33162282
chr1 172863444 172863449 GATA2 JASPAR yes 118400352
chr1 172863452 172863456 NFE TRANSFAC yes 33162283
chr1 172863452 172863456 NFE TRANSFAC yes 118400353
chr1 172863455 172863465 NKX2-3 JASPAR yes 33162284
chr1 172863455 172863465 NKX2-3 JASPAR yes 118400354
chr1 172863456 172863465 NKX2-8 JASPAR yes 33162285
chr1 172863456 172863465 NKX2-8 JASPAR yes 118400355
chr1 172863457 172863472 STAT1 JASPAR yes 33162286
chr1 172863457 172863472 STAT1 JASPAR yes 118400356
chr1 172863459 172863470 STAT1 JASPAR yes 33162287
chr1 172863459 172863470 STAT3 JASPAR yes 33162288
chr1 172863459 172863470 STAT1 JASPAR yes 118400357
chr1 172863459 172863470 STAT3 JASPAR yes 118400358
chr1 172863479 172863494 AR JASPAR yes 33162289
chr1 172863479 172863494 AR JASPAR yes 118400359
chr1 172863479 172863496 NR3C1 JASPAR yes 33162290
chr1 172863479 172863496 NR3C2 JASPAR yes 33162291
chr1 172863479 172863496 NR3C1 JASPAR yes 118400360
chr1 172863479 172863496 NR3C2 JASPAR yes 118400361
chr1 172863502 172863516 ONECUT3 JASPAR yes 33162292
chr1 172863502 172863516 ONECUT3 JASPAR yes 118400362
chr1 172863506 172863520 TLX1 JASPAR yes 33162293
chr1 172863506 172863520 TLX1 JASPAR yes 118400363
chr1 172863517 172863521 H1TF2 TRANSFAC yes 33162294
chr1 172863517 172863521 NFE TRANSFAC yes 33162295
chr1 172863517 172863521 SRF TRANSFAC yes 33162296
chr1 172863517 172863521 H1TF2 TRANSFAC yes 118400364
chr1 172863517 172863521 NFE TRANSFAC yes 118400365
chr1 172863517 172863521 SRF TRANSFAC yes 118400366
chr1 172863519 172863529 HOXC10 JASPAR yes 33162297
chr1 172863519 172863529 HOXD11 JASPAR yes 33162298
chr1 172863519 172863529 HOXC10 JASPAR yes 118400367
chr1 172863519 172863529 HOXD11 JASPAR yes 118400368
chr1 172863519 172863530 HOXC11 JASPAR yes 33162299
chr1 172863519 172863530 HOXD12 JASPAR yes 33162300
chr1 172863519 172863530 HOXC11 JASPAR yes 118400369
chr1 172863519 172863530 HOXD12 JASPAR yes 118400370
chr1 172863520 172863531 CDX2 JASPAR yes 33162301
chr1 172863520 172863531 CDX2 JASPAR yes 118400371
chr1 172863531 172863534 MYB TRANSFAC yes 33162302
chr1 172863531 172863534 MYB TRANSFAC yes 118400372
chr1 172863534 172863538 H1TF2 TRANSFAC yes 33162303
chr1 172863534 172863538 NFE TRANSFAC yes 33162304
chr1 172863534 172863538 SRF TRANSFAC yes 33162305
chr1 172863534 172863538 H1TF2 TRANSFAC yes 118400373
chr1 172863534 172863538 NFE TRANSFAC yes 118400374
chr1 172863534 172863538 SRF TRANSFAC yes 118400375
chr1 172863549 172863554 MYC TRANSFAC yes 33162306
chr1 172863549 172863554 MYC TRANSFAC yes 118400376
chr1 172863573 172863587 ONECUT1 JASPAR yes 33162307
chr1 172863573 172863587 ONECUT2 JASPAR yes 33162308
chr1 172863573 172863587 ONECUT3 JASPAR yes 33162309
chr1 172863573 172863587 ONECUT1 JASPAR yes 118400377
chr1 172863573 172863587 ONECUT2 JASPAR yes 118400378
chr1 172863573 172863587 ONECUT3 JASPAR yes 118400379
chr1 172863576 172863586 CUX1 JASPAR yes 33162310
chr1 172863576 172863586 CUX2 JASPAR yes 33162311
chr1 172863576 172863586 CUX1 JASPAR yes 118400380
chr1 172863576 172863586 CUX2 JASPAR yes 118400381
chr1 172863598 172863602 YY1 TRANSFAC yes 33162312
chr1 172863598 172863602 YY1 TRANSFAC yes 118400382
chr1 172863603 172863609 MZF1 JASPAR yes 33162313
chr1 172863603 172863609 MZF1 JASPAR yes 118400383
chr1 172863606 172863610 H1TF2 TRANSFAC yes 33162314
chr1 172863606 172863610 NFE TRANSFAC yes 33162315
chr1 172863606 172863610 SRF TRANSFAC yes 33162316
chr1 172863606 172863610 H1TF2 TRANSFAC yes 118400384
chr1 172863606 172863610 NFE TRANSFAC yes 118400385
chr1 172863606 172863610 SRF TRANSFAC yes 118400386
chr1 172863611 172863622 DMRT3 JASPAR yes 33162317
chr1 172863611 172863622 DMRT3 JASPAR yes 118400387
chr1 172863618 172863632 TCF7L2 JASPAR yes 33162318
chr1 172863618 172863632 TCF7L2 JASPAR yes 118400388
chr1 172863618 172863633 LEF1 JASPAR yes 33162319
chr1 172863618 172863633 LEF1 JASPAR yes 118400389
chr1 172863635 172863649 PAX6 JASPAR yes 33162320
chr1 172863635 172863649 PAX6 JASPAR yes 118400390
chr1 172863644 172863649 H4TF1 TRANSFAC yes 33162321
chr1 172863644 172863649 H4TF1 TRANSFAC yes 118400391
chr1 172863649 172863663 JUN JASPAR yes 33162322
chr1 172863649 172863663 JUN JASPAR yes 118400392
chr1 172863651 172863662 BATF JASPAR yes 33162323
chr1 172863651 172863662 BATF JASPAR yes 118400393
chr1 172863652 172863663 FOSL2 JASPAR yes 33162324
chr1 172863652 172863663 JUNB JASPAR yes 33162325
chr1 172863652 172863663 FOSL2 JASPAR yes 118400394
chr1 172863652 172863663 JUNB JASPAR yes 118400395
chr1 172863653 172863664 FOS JASPAR yes 33162326
chr1 172863653 172863664 FOSL1 JASPAR yes 33162327
chr1 172863653 172863664 JUND JASPAR yes 33162328
chr1 172863653 172863664 NFE2 JASPAR yes 33162329
chr1 172863653 172863664 FOS JASPAR yes 118400396
chr1 172863653 172863664 FOSL1 JASPAR yes 118400397
chr1 172863653 172863664 JUND JASPAR yes 118400398
chr1 172863653 172863664 NFE2 JASPAR yes 118400399
chr1 172863654 172863663 JDP2 JASPAR yes 33162330
chr1 172863654 172863663 JDP2 JASPAR yes 118400400
chr1 172863654 172863665 JUNB JASPAR yes 33162331
chr1 172863654 172863665 JUNB JASPAR yes 118400401
chr1 172863666 172863681 MEF2C JASPAR yes 33162332
chr1 172863666 172863681 MEF2C JASPAR yes 118400402
chr1 172863687 172863702 HNF1A JASPAR yes 33162333
chr1 172863687 172863702 HNF1A JASPAR yes 118400403
chr1 172863688 172863701 HNF1B JASPAR yes 33162334
chr1 172863688 172863701 HNF1B JASPAR yes 118400404
chr1 172863691 172863703 PBX1 JASPAR yes 33162335
chr1 172863691 172863703 PBX1 JASPAR yes 118400405
chr1 172863709 172863719 REL JASPAR yes 33162336
chr1 172863709 172863719 REL JASPAR yes 118400406
chr1 172863709 172863720 NFKB1 JASPAR yes 33162337
chr1 172863709 172863720 NFKB1 JASPAR yes 118400407
chr1 172863719 172863733 GATA2 JASPAR yes 33162338
chr1 172863719 172863733 GATA2 JASPAR yes 118400408
chr1 172863721 172863727 MYC TRANSFAC yes 33162339
chr1 172863721 172863727 MYC TRANSFAC yes 118400409
chr1 172863723 172863731 GATA3 JASPAR yes 33162340
chr1 172863723 172863731 GATA5 JASPAR yes 33162341
chr1 172863723 172863731 GATA3 JASPAR yes 118400410
chr1 172863723 172863731 GATA5 JASPAR yes 118400411
chr1 172863733 172863753 TP53 JASPAR yes 33162342
chr1 172863733 172863753 TP53 JASPAR yes 118400412
chr1 172863736 172863754 TP53 JASPAR yes 33162343
chr1 172863736 172863754 TP53 JASPAR yes 118400413
chr1 172863762 172863771 THAP1 JASPAR yes 33162344
chr1 172863762 172863771 THAP1 JASPAR yes 118400414
chr1 172863765 172863769 LFA1 TRANSFAC yes 33162345
chr1 172863765 172863769 LFA1 TRANSFAC yes 118400415
chr1 172863768 172863779 FOXA1 JASPAR yes 33162346
chr1 172863768 172863779 FOXA1 JASPAR yes 118400416
chr1 172863768 172863783 FOXA1 JASPAR yes 33162347
chr1 172863768 172863783 FOXA1 JASPAR yes 118400417
chr1 172863770 172863781 FOXP2 JASPAR yes 33162348
chr1 172863770 172863781 FOXP2 JASPAR yes 118400418
chr1 172863771 172863775 TEAD2 TRANSFAC yes 33162349
chr1 172863771 172863775 TEAD2 TRANSFAC yes 118400419
chr1 172863771 172863776 TBP TRANSFAC yes 33162350
chr1 172863771 172863776 TBP TRANSFAC yes 118400420
chr1 172863784 172863802 MAFF JASPAR yes 33162351
chr1 172863784 172863802 MAFF JASPAR yes 118400421
chr1 172863825 172863834 THAP1 JASPAR yes 33162352
chr1 172863825 172863834 THAP1 JASPAR yes 118400422
chr1 172863828 172863832 LFA1 TRANSFAC yes 33162353
chr1 172863828 172863832 LFA1 TRANSFAC yes 118400423
SNP sites on vista3920[chr1:172863432-172863838]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 172863522 rs542647674 T C
CDX2 HOXC10 HOXC11 HOXD11 HOXD12
731660
chr1 172863647 rs61828386 T C
H4TF1 PAX6
731661
Genes possibly regulated by vista3920[chr1:172863432-172863838]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista3920[chr1:172863432-172863838]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results