EnhancerDB
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  3. rs61828386[chr1:172863647]
Enhancers that have rs61828386[chr1:172863647]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
chr1 172863432 172863838 vista3920
VISTA
Transcript factors that have rs61828386[chr1:172863647]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172863380 172863976 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846231
chr1 172863500 172863736 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846232
chr1 172863507 172863837 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846233
chr1 172863635 172863649 PAX6 JASPAR yes 33162320
chr1 172863635 172863649 PAX6 JASPAR yes 118400390
chr1 172863644 172863649 H4TF1 TRANSFAC yes 33162321
chr1 172863644 172863649 H4TF1 TRANSFAC yes 118400391
Genes associated with rs61828386[chr1:172863647], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More