EnhancerDB
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  3. vista3945[chr1:173379915-173380349]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3945[chr1:173379915-173380349]
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Tissue distribution of vista3945
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Transcription factor that possibly regulate vista3945[chr1:173379915-173380349]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 173379643 173380556 POLR2A UCSC Txn Factor no Conserved 107846636
chr1 173379924 173380336 RUNX3 UCSC Txn Factor no Conserved 107846658
chr1 173379953 173380385 RELA UCSC Txn Factor no Conserved 107846664
chr1 173379940 173379955 HNF4A JASPAR yes 33196722
chr1 173379940 173379955 HNF4A JASPAR yes 118401571
chr1 173379941 173379955 RXRB JASPAR yes 33196723
chr1 173379941 173379955 RXRG JASPAR yes 33196724
chr1 173379941 173379955 RXRB JASPAR yes 118401572
chr1 173379941 173379955 RXRG JASPAR yes 118401573
chr1 173379941 173379956 HNF4G JASPAR yes 33196725
chr1 173379941 173379956 HNF4G JASPAR yes 118401574
chr1 173379959 173379974 TFAP2C JASPAR yes 33196726
chr1 173379959 173379974 TFAP2C JASPAR yes 118401575
chr1 173379960 173379971 TFAP2A JASPAR yes 33196727
chr1 173379960 173379971 TFAP2B JASPAR yes 33196728
chr1 173379960 173379971 TFAP2C JASPAR yes 33196729
chr1 173379960 173379971 TFAP2A JASPAR yes 118401576
chr1 173379960 173379971 TFAP2B JASPAR yes 118401577
chr1 173379960 173379971 TFAP2C JASPAR yes 118401578
chr1 173379994 173380005 STAT3 JASPAR yes 33196730
chr1 173379994 173380005 STAT3 JASPAR yes 118401579
chr1 173380013 173380021 MEIS2 JASPAR yes 33196731
chr1 173380013 173380021 MEIS3 JASPAR yes 33196732
chr1 173380013 173380021 MEIS2 JASPAR yes 118401580
chr1 173380013 173380021 MEIS3 JASPAR yes 118401581
chr1 173380022 173380039 NR3C1 JASPAR yes 33196733
chr1 173380022 173380039 NR3C2 JASPAR yes 33196734
chr1 173380022 173380039 NR3C1 JASPAR yes 118401582
chr1 173380022 173380039 NR3C2 JASPAR yes 118401583
chr1 173380038 173380051 NFKB2 JASPAR yes 33196735
chr1 173380038 173380051 NFKB2 JASPAR yes 118401584
chr1 173380056 173380068 NHLH1 JASPAR yes 33196736
chr1 173380056 173380068 NHLH1 JASPAR yes 118401585
chr1 173380057 173380067 NHLH1 JASPAR yes 33196737
chr1 173380057 173380067 NHLH1 JASPAR yes 118401586
chr1 173380068 173380073 TFAP2A TRANSFAC yes 33196738
chr1 173380068 173380073 TFAP2A TRANSFAC yes 118401587
chr1 173380068 173380074 MZF1 JASPAR yes 33196739
chr1 173380068 173380074 MZF1 JASPAR yes 118401588
chr1 173380083 173380098 TP53 JASPAR yes 33196740
chr1 173380083 173380098 TP53 JASPAR yes 118401589
chr1 173380100 173380115 RUNX2 JASPAR yes 33196741
chr1 173380100 173380115 RUNX2 JASPAR yes 118401590
chr1 173380103 173380114 RUNX1 JASPAR yes 33196742
chr1 173380103 173380114 RUNX1 JASPAR yes 118401591
chr1 173380104 173380114 RUNX3 JASPAR yes 33196743
chr1 173380104 173380114 RUNX3 JASPAR yes 118401592
chr1 173380105 173380114 RUNX2 JASPAR yes 33196744
chr1 173380105 173380114 RUNX2 JASPAR yes 118401593
chr1 173380147 173380154 MEIS1 JASPAR yes 33196745
chr1 173380147 173380154 MEIS1 JASPAR yes 118401594
chr1 173380147 173380155 MEIS2 JASPAR yes 33196746
chr1 173380147 173380155 MEIS3 JASPAR yes 33196747
chr1 173380147 173380155 MEIS2 JASPAR yes 118401595
chr1 173380147 173380155 MEIS3 JASPAR yes 118401596
chr1 173380150 173380161 FLI1 JASPAR yes 33196748
chr1 173380150 173380161 FLI1 JASPAR yes 118401597
chr1 173380151 173380159 EHF JASPAR yes 33196749
chr1 173380151 173380159 EHF JASPAR yes 118401598
chr1 173380163 173380176 NFKB1 JASPAR yes 33196750
chr1 173380163 173380176 NFKB2 JASPAR yes 33196751
chr1 173380163 173380176 NFKB1 JASPAR yes 118401599
chr1 173380163 173380176 NFKB2 JASPAR yes 118401600
chr1 173380164 173380175 NFKB1 JASPAR yes 33196752
chr1 173380164 173380175 NFKB1 JASPAR yes 118401601
chr1 173380165 173380170 ETS2 TRANSFAC yes 33196753
chr1 173380165 173380170 ETS2 TRANSFAC yes 118401602
chr1 173380165 173380175 NFKB1 JASPAR yes 33196754
chr1 173380165 173380175 RELA JASPAR yes 33196755
chr1 173380165 173380175 NFKB1 JASPAR yes 118401603
chr1 173380165 173380175 RELA JASPAR yes 118401604
chr1 173380165 173380176 NFKB1 JASPAR yes 33196756
chr1 173380165 173380176 NFKB1 JASPAR yes 118401605
chr1 173380178 173380183 H4TF1 TRANSFAC yes 33196757
chr1 173380178 173380183 H4TF1 TRANSFAC yes 118401606
chr1 173380178 173380197 CTCF JASPAR yes 33196758
chr1 173380178 173380197 CTCF JASPAR yes 118401607
chr1 173380198 173380202 H4TF2 TRANSFAC yes 33196759
chr1 173380198 173380202 H4TF2 TRANSFAC yes 118401608
chr1 173380210 173380222 CREB1 JASPAR yes 33196760
chr1 173380210 173380222 CREB1 JASPAR yes 118401609
chr1 173380215 173380220 ATF1 TRANSFAC yes 33196761
chr1 173380215 173380220 ATF1 TRANSFAC yes 118401610
chr1 173380228 173380243 HSF1 JASPAR yes 33196762
chr1 173380228 173380243 HSF1 JASPAR yes 118401611
chr1 173380240 173380255 RFX5 JASPAR yes 33196763
chr1 173380240 173380255 RFX5 JASPAR yes 118401612
chr1 173380257 173380261 LFA1 TRANSFAC yes 33196764
chr1 173380257 173380261 LFA1 TRANSFAC yes 118401613
chr1 173380277 173380281 ESR1 TRANSFAC yes 33196765
chr1 173380277 173380281 ESR1 TRANSFAC yes 118401614
chr1 173380282 173380287 ETS2 TRANSFAC yes 33196766
chr1 173380282 173380287 ETS2 TRANSFAC yes 118401615
chr1 173380282 173380297 LEF1 JASPAR yes 33196767
chr1 173380282 173380297 LEF1 JASPAR yes 118401616
chr1 173380290 173380295 ETS2 TRANSFAC yes 33196768
chr1 173380290 173380295 ETS2 TRANSFAC yes 118401617
chr1 173380303 173380312 ZEB1 JASPAR yes 33196769
chr1 173380303 173380312 ZEB1 JASPAR yes 118401618
chr1 173380306 173380311 USF2 TRANSFAC yes 33196770
chr1 173380306 173380311 USF2 TRANSFAC yes 118401619
chr1 173380312 173380318 GATA3 JASPAR yes 33196771
chr1 173380312 173380318 GATA3 JASPAR yes 118401620
chr1 173380325 173380329 NFE TRANSFAC yes 33196772
chr1 173380325 173380329 NFE TRANSFAC yes 118401621
chr1 173380325 173380330 GATA1 TRANSFAC yes 33196773
chr1 173380325 173380330 GATA1 TRANSFAC yes 118401622
chr1 173380325 173380331 GATA3 JASPAR yes 33196774
chr1 173380325 173380331 GATA3 JASPAR yes 118401623
chr1 173380332 173380347 TFAP2C JASPAR yes 33196775
chr1 173380332 173380347 TFAP2C JASPAR yes 118401624
chr1 173380333 173380344 TFAP2A JASPAR yes 33196776
chr1 173380333 173380344 TFAP2B JASPAR yes 33196777
chr1 173380333 173380344 TFAP2C JASPAR yes 33196778
chr1 173380333 173380344 TFAP2A JASPAR yes 118401625
chr1 173380333 173380344 TFAP2B JASPAR yes 118401626
chr1 173380333 173380344 TFAP2C JASPAR yes 118401627
SNP sites on vista3945[chr1:173379915-173380349]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 173379932 rs183532988 C T
POLR2A RUNX3
734650
chr1 173379994 rs6680079 A G
POLR2A RELA RUNX3 STAT3
734651
chr1 173380305 rs577391087 C T
POLR2A RELA RUNX3 ZEB1
734652
chr1 173380323 rs10798279 C T
POLR2A RELA RUNX3
734653
Genes possibly regulated by vista3945[chr1:173379915-173380349]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 173446405 173457946 + PRDX6 ENSG00000117592.8 173446405 0.68 0.99 1577 33944
Expression level of Genes
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miRNAs possibly regulated by vista3945[chr1:173379915-173380349]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results