EnhancerDB
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  3. rs577391087[chr1:173380305]
Enhancers that have rs577391087[chr1:173380305]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
chr1 173379915 173380349 vista3945
VISTA
Transcript factors that have rs577391087[chr1:173380305]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173379643 173380556 POLR2A UCSC Txn Factor no Conserved 107846636
chr1 173379643 173380556 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846637
chr1 173379821 173380385 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846643
chr1 173379831 173380331 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846645
chr1 173379831 173380367 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846646
chr1 173379835 173380519 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846647
chr1 173379873 173380393 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846650
chr1 173379893 173380483 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846653
chr1 173379899 173380335 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846655
chr1 173379908 173380344 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846656
chr1 173379922 173380332 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846657
chr1 173379924 173380336 RUNX3 UCSC Txn Factor no Conserved 107846658
chr1 173379924 173380336 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846659
chr1 173379926 173380306 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846660
chr1 173379937 173380317 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846663
chr1 173379953 173380385 RELA UCSC Txn Factor no Conserved 107846664
chr1 173379980 173380343 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846668
chr1 173380044 173380408 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846672
chr1 173380070 173380350 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846673
chr1 173380076 173380320 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846674
chr1 173380084 173380380 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846675
chr1 173380303 173380312 ZEB1 JASPAR yes 33196769
chr1 173380303 173380312 ZEB1 JASPAR yes 118401618
Genes associated with rs577391087[chr1:173380305], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More