EnhancerDB
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  3. rs6680079[chr1:173379994]
Enhancers that have rs6680079[chr1:173379994]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
chr1 173379915 173380349 vista3945
VISTA
Transcript factors that have rs6680079[chr1:173379994]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173379643 173380556 POLR2A UCSC Txn Factor no Conserved 107846636
chr1 173379643 173380556 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846637
chr1 173379644 173380304 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846638
chr1 173379818 173380254 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846642
chr1 173379821 173380385 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846643
chr1 173379831 173380267 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846644
chr1 173379831 173380331 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846645
chr1 173379831 173380367 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846646
chr1 173379835 173380519 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846647
chr1 173379836 173380166 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846648
chr1 173379838 173380248 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846649
chr1 173379873 173380393 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846650
chr1 173379876 173380276 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846651
chr1 173379889 173380193 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846652
chr1 173379893 173380483 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846653
chr1 173379896 173380236 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846654
chr1 173379899 173380335 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846655
chr1 173379908 173380344 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846656
chr1 173379922 173380332 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846657
chr1 173379924 173380336 RUNX3 UCSC Txn Factor no Conserved 107846658
chr1 173379924 173380336 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846659
chr1 173379926 173380306 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846660
chr1 173379931 173380251 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846661
chr1 173379933 173380253 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846662
chr1 173379937 173380317 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846663
chr1 173379953 173380385 RELA UCSC Txn Factor no Conserved 107846664
chr1 173379960 173380270 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846665
chr1 173379963 173380227 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846666
chr1 173379969 173380169 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846667
chr1 173379980 173380343 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846668
chr1 173379994 173380005 STAT3 JASPAR yes 33196730
chr1 173379994 173380005 STAT3 JASPAR yes 118401579
Genes associated with rs6680079[chr1:173379994], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More