EnhancerDB
  1. Home
  2. Enhancers
  3. vista3948[chr1:173392092-173392451]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3948[chr1:173392092-173392451]
Back to top
Tissue distribution of vista3948
Back to top
Transcription factor that possibly regulate vista3948[chr1:173392092-173392451]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 173392099 173392107 FOXL1 JASPAR yes 33198471
chr1 173392099 173392107 FOXL1 JASPAR yes 118401731
chr1 173392101 173392116 FOXA1 JASPAR yes 33198472
chr1 173392101 173392116 FOXA1 JASPAR yes 118401732
chr1 173392104 173392115 FOXB1 JASPAR yes 33198473
chr1 173392104 173392115 FOXB1 JASPAR yes 118401733
chr1 173392104 173392116 POU3F1 JASPAR yes 33198474
chr1 173392104 173392116 POU3F1 JASPAR yes 118401734
chr1 173392105 173392123 NR3C1 JASPAR yes 33198475
chr1 173392105 173392123 NR3C1 JASPAR yes 118401735
chr1 173392111 173392115 YY1 TRANSFAC yes 33198476
chr1 173392111 173392115 YY1 TRANSFAC yes 118401736
chr1 173392111 173392126 FOXP1 JASPAR yes 33198477
chr1 173392111 173392126 FOXP1 JASPAR yes 118401737
chr1 173392112 173392127 FOXP1 JASPAR yes 33198478
chr1 173392112 173392127 FOXP1 JASPAR yes 118401738
chr1 173392113 173392128 FOXP1 JASPAR yes 33198479
chr1 173392113 173392128 FOXP1 JASPAR yes 118401739
chr1 173392116 173392131 MEF2C JASPAR yes 33198480
chr1 173392116 173392131 MEF2C JASPAR yes 118401740
chr1 173392133 173392152 PAX5 JASPAR yes 33198481
chr1 173392133 173392152 PAX5 JASPAR yes 118401741
chr1 173392144 173392153 THAP1 JASPAR yes 33198482
chr1 173392144 173392153 THAP1 JASPAR yes 118401742
chr1 173392178 173392199 ZNF263 JASPAR yes 33198483
chr1 173392178 173392199 ZNF263 JASPAR yes 118401743
chr1 173392185 173392197 HINFP JASPAR yes 33198484
chr1 173392185 173392197 HINFP JASPAR yes 118401744
chr1 173392189 173392197 SP1 TRANSFAC yes 33198485
chr1 173392189 173392197 SP1 TRANSFAC yes 118401745
chr1 173392189 173392199 SP1 JASPAR yes 33198486
chr1 173392189 173392199 SP1 JASPAR yes 118401746
chr1 173392213 173392234 ZNF263 JASPAR yes 33198487
chr1 173392213 173392234 ZNF263 JASPAR yes 118401747
chr1 173392244 173392254 ALX3 JASPAR yes 33198488
chr1 173392244 173392254 MIXL1 JASPAR yes 33198489
chr1 173392244 173392254 NOTO JASPAR yes 33198490
chr1 173392244 173392254 POU6F1 JASPAR yes 33198491
chr1 173392244 173392254 ALX3 JASPAR yes 118401748
chr1 173392244 173392254 MIXL1 JASPAR yes 118401749
chr1 173392244 173392254 NOTO JASPAR yes 118401750
chr1 173392244 173392254 POU6F1 JASPAR yes 118401751
chr1 173392245 173392253 ISX JASPAR yes 33198492
chr1 173392245 173392253 LMX1A JASPAR yes 33198493
chr1 173392245 173392253 LMX1B JASPAR yes 33198494
chr1 173392245 173392253 NKX6-1 JASPAR yes 33198495
chr1 173392245 173392253 NKX6-2 JASPAR yes 33198496
chr1 173392245 173392253 PRRX1 JASPAR yes 33198497
chr1 173392245 173392253 RAX2 JASPAR yes 33198498
chr1 173392245 173392253 SHOX JASPAR yes 33198499
chr1 173392245 173392253 UNCX JASPAR yes 33198500
chr1 173392245 173392253 VAX1 JASPAR yes 33198501
chr1 173392245 173392253 ISX JASPAR yes 118401752
chr1 173392245 173392253 LMX1A JASPAR yes 118401753
chr1 173392245 173392253 LMX1B JASPAR yes 118401754
chr1 173392245 173392253 NKX6-1 JASPAR yes 118401755
chr1 173392245 173392253 NKX6-2 JASPAR yes 118401756
chr1 173392245 173392253 PRRX1 JASPAR yes 118401757
chr1 173392245 173392253 RAX2 JASPAR yes 118401758
chr1 173392245 173392253 SHOX JASPAR yes 118401759
chr1 173392245 173392253 UNCX JASPAR yes 118401760
chr1 173392245 173392253 VAX1 JASPAR yes 118401761
chr1 173392245 173392258 DUXA JASPAR yes 33198502
chr1 173392245 173392258 DUXA JASPAR yes 118401762
chr1 173392246 173392257 DUX4 JASPAR yes 33198503
chr1 173392246 173392257 PHOX2A JASPAR yes 33198504
chr1 173392246 173392257 PROP1 JASPAR yes 33198505
chr1 173392246 173392257 DUX4 JASPAR yes 118401763
chr1 173392246 173392257 PHOX2A JASPAR yes 118401764
chr1 173392246 173392257 PROP1 JASPAR yes 118401765
chr1 173392253 173392265 MEF2A JASPAR yes 33198506
chr1 173392253 173392265 MEF2B JASPAR yes 33198507
chr1 173392253 173392265 MEF2D JASPAR yes 33198508
chr1 173392253 173392265 MEF2A JASPAR yes 118401766
chr1 173392253 173392265 MEF2B JASPAR yes 118401767
chr1 173392253 173392265 MEF2D JASPAR yes 118401768
chr1 173392281 173392293 E2F8 JASPAR yes 33198509
chr1 173392281 173392293 E2F8 JASPAR yes 118401769
chr1 173392288 173392292 H1TF2 TRANSFAC yes 33198510
chr1 173392288 173392292 NFE TRANSFAC yes 33198511
chr1 173392288 173392292 SRF TRANSFAC yes 33198512
chr1 173392288 173392292 H1TF2 TRANSFAC yes 118401770
chr1 173392288 173392292 NFE TRANSFAC yes 118401771
chr1 173392288 173392292 SRF TRANSFAC yes 118401772
chr1 173392303 173392318 LEF1 JASPAR yes 33198513
chr1 173392303 173392318 LEF1 JASPAR yes 118401773
chr1 173392333 173392348 MEF2C JASPAR yes 33198514
chr1 173392333 173392348 MEF2C JASPAR yes 118401774
chr1 173392349 173392359 HOXA13 JASPAR yes 33198515
chr1 173392349 173392359 HOXB13 JASPAR yes 33198516
chr1 173392349 173392359 HOXC10 JASPAR yes 33198517
chr1 173392349 173392359 HOXD13 JASPAR yes 33198518
chr1 173392349 173392359 HOXA13 JASPAR yes 118401775
chr1 173392349 173392359 HOXB13 JASPAR yes 118401776
chr1 173392349 173392359 HOXC10 JASPAR yes 118401777
chr1 173392349 173392359 HOXD13 JASPAR yes 118401778
chr1 173392349 173392360 HOXA10 JASPAR yes 33198519
chr1 173392349 173392360 HOXA10 JASPAR yes 118401779
chr1 173392350 173392359 CDX1 JASPAR yes 33198520
chr1 173392350 173392359 CDX1 JASPAR yes 118401780
chr1 173392350 173392360 MNX1 JASPAR yes 33198521
chr1 173392350 173392360 MNX1 JASPAR yes 118401781
chr1 173392350 173392361 CDX2 JASPAR yes 33198522
chr1 173392350 173392361 CDX2 JASPAR yes 118401782
chr1 173392359 173392367 TBX15 JASPAR yes 33198523
chr1 173392359 173392367 TBX15 JASPAR yes 118401783
chr1 173392363 173392374 NFIL3 JASPAR yes 33198524
chr1 173392363 173392374 NFIL3 JASPAR yes 118401784
chr1 173392383 173392388 H4TF1 TRANSFAC yes 33198525
chr1 173392383 173392388 H4TF1 TRANSFAC yes 118401785
chr1 173392392 173392402 GSC2 JASPAR yes 33198526
chr1 173392392 173392402 GSC JASPAR yes 33198527
chr1 173392392 173392402 GSC2 JASPAR yes 118401786
chr1 173392392 173392402 GSC JASPAR yes 118401787
chr1 173392393 173392401 OTX1 JASPAR yes 33198528
chr1 173392393 173392401 OTX2 JASPAR yes 33198529
chr1 173392393 173392401 RHOXF1 JASPAR yes 33198530
chr1 173392393 173392401 OTX1 JASPAR yes 118401788
chr1 173392393 173392401 OTX2 JASPAR yes 118401789
chr1 173392393 173392401 RHOXF1 JASPAR yes 118401790
chr1 173392393 173392402 PITX3 JASPAR yes 33198531
chr1 173392393 173392402 PITX3 JASPAR yes 118401791
chr1 173392420 173392436 NFYA JASPAR yes 33198532
chr1 173392420 173392436 NFYA JASPAR yes 118401792
chr1 173392425 173392429 H1TF2 TRANSFAC yes 33198533
chr1 173392425 173392429 NFE TRANSFAC yes 33198534
chr1 173392425 173392429 SRF TRANSFAC yes 33198535
chr1 173392425 173392429 H1TF2 TRANSFAC yes 118401793
chr1 173392425 173392429 NFE TRANSFAC yes 118401794
chr1 173392425 173392429 SRF TRANSFAC yes 118401795
chr1 173392425 173392435 HOXB13 JASPAR yes 33198536
chr1 173392425 173392435 HOXB13 JASPAR yes 118401796
chr1 173392429 173392432 MYB TRANSFAC yes 33198537
chr1 173392429 173392432 MYB TRANSFAC yes 118401797
SNP sites on vista3948[chr1:173392092-173392451]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 173392103 rs7555324 A G
FOXA1 FOXL1
734808
chr1 173392113 rs11296675 AT A
FOXA1 FOXB1 FOXP1 NR3C1 POU3F1 YY1
734809
chr1 173392113 rs796146806 AT A
FOXA1 FOXB1 FOXP1 NR3C1 POU3F1 YY1
734810
chr1 173392146 rs6425232 T C
PAX5 THAP1
734811
chr1 173392165 rs181360272 C T no 734812
chr1 173392166 rs7520641 G A no 734813
chr1 173392178 rs543841668 G A
ZNF263
734814
chr1 173392193 rs556894414 C CG
HINFP SP1 ZNF263
734815
Genes possibly regulated by vista3948[chr1:173392092-173392451]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 173446405 173457946 + PRDX6 ENSG00000117592.8 173446405 0.68 0.99 1577 46046
Expression level of Genes
Back to top
miRNAs possibly regulated by vista3948[chr1:173392092-173392451]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results